Vertex models of epithelial morphogenesis

AG Fletcher, M Osterfield, RE Baker, SY Shvartsman - Biophysical journal, 2014 - cell.com
The dynamic behavior of epithelial cell sheets plays a central role during numerous
developmental processes. Genetic and imaging studies of epithelial morphogenesis in a …

[HTML][HTML] How computational models can help unlock biological systems

GW Brodland - Seminars in cell & developmental biology, 2015 - Elsevier
With computation models playing an ever increasing role in the advancement of science, it is
important that researchers understand what it means to model something; recognize the …

[图书][B] The mathematics and mechanics of biological growth

A Goriely - 2017 - books.google.com
This monograph presents a general mathematical theory for biological growth. It provides
both a conceptual and a technical foundation for the understanding and analysis of …

Active vertex model for cell-resolution description of epithelial tissue mechanics

DL Barton, S Henkes, CJ Weijer… - PLoS computational …, 2017 - journals.plos.org
We introduce an Active Vertex Model (AVM) for cell-resolution studies of the mechanics of
confluent epithelial tissues consisting of tens of thousands of cells, with a level of detail …

Comparing individual-based approaches to modelling the self-organization of multicellular tissues

JM Osborne, AG Fletcher, JM Pitt-Francis… - PLoS computational …, 2017 - journals.plos.org
The coordinated behaviour of populations of cells plays a central role in tissue growth and
renewal. Cells react to their microenvironment by modulating processes such as movement …

Measuring forces and stresses in situ in living tissues

K Sugimura, PF Lenne, F Graner - Development, 2016 - journals.biologists.com
Development, homeostasis and regeneration of tissues result from a complex combination
of genetics and mechanics, and progresses in the former have been quicker than in the …

Implementing vertex dynamics models of cell populations in biology within a consistent computational framework

AG Fletcher, JM Osborne, PK Maini… - Progress in biophysics …, 2013 - Elsevier
The dynamic behaviour of epithelial cell sheets plays a central role during development,
growth, disease and wound healing. These processes occur as a result of cell adhesion …

Cellular Potts modeling of complex multicellular behaviors in tissue morphogenesis

T Hirashima, EG Rens… - Development, growth & …, 2017 - Wiley Online Library
Mathematical modeling is an essential approach for the understanding of complex
multicellular behaviors in tissue morphogenesis. Here, we review the cellular Potts model …

Modeling growth in biological materials

GW Jones, SJ Chapman - Siam review, 2012 - SIAM
The biomechanical modeling of growing tissues has recently become an area of intense
interest. In particular, the interplay between growth patterns and mechanical stress is of …

An integrative computational model for intestinal tissue renewal

IMM Van Leeuwen, GR Mirams, A Walter… - Cell …, 2009 - Wiley Online Library
Objectives: The luminal surface of the gut is lined with a monolayer of epithelial cells that
acts as a nutrient absorptive engine and protective barrier. To maintain its integrity and …