Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature
Covering: 1988 to 2012 This review presents recommended nomenclature for the
biosynthesis of ribosomally synthesized and post-translationally modified peptides (RiPPs) …
biosynthesis of ribosomally synthesized and post-translationally modified peptides (RiPPs) …
[HTML][HTML] Radical S-Adenosylmethionine Enzymes
JB Broderick, BR Duffus, KS Duschene… - Chemical …, 2014 - ACS Publications
It was once widely held that nearly all reactions in biology were catalyzed via mechanisms
involving paired electron species. Beginning approximately 40 years ago, this paradigm was …
involving paired electron species. Beginning approximately 40 years ago, this paradigm was …
Structure and biosynthesis of a macrocyclic peptide containing an unprecedented lysine-to-tryptophan crosslink
KR Schramma, LB Bushin, MR Seyedsayamdost - Nature chemistry, 2015 - nature.com
Streptococcal bacteria use peptide signals as a means of intraspecies communication.
These peptides can contain unusual post-translational modifications, providing opportunities …
These peptides can contain unusual post-translational modifications, providing opportunities …
Methylthioadenosine/S‐adenosylhomocysteine nucleosidase, a critical enzyme for bacterial metabolism
N Parveen, KA Cornell - Molecular microbiology, 2011 - Wiley Online Library
The importance of methylthioadenosine/S‐adenosylhomocysteine (MTA/SAH) nucleosidase
in bacteria has started to be appreciated only in the past decade. A comprehensive analysis …
in bacteria has started to be appreciated only in the past decade. A comprehensive analysis …
A prominent glycyl radical enzyme in human gut microbiomes metabolizes trans-4-hydroxy-l-proline
INTRODUCTION The microbes that live in and on our bodies (the human microbiome)
profoundly affect human health and disease. For example, within the lower gastrointestinal …
profoundly affect human health and disease. For example, within the lower gastrointestinal …
Intrigues and intricacies of the biosynthetic pathways for the enzymatic quinocofactors: PQQ, TTQ, CTQ, TPQ, and LTQ
JP Klinman, F Bonnot - Chemical reviews, 2014 - ACS Publications
Protein and nucleic acid modification processes play a central role in cellular viability. These
range from the regulation of transcription via the modification of DNA, 1 the splicing of RNA …
range from the regulation of transcription via the modification of DNA, 1 the splicing of RNA …
[HTML][HTML] SPASM and twitch domains in S-adenosylmethionine (SAM) radical enzymes
TAJ Grell, PJ Goldman, CL Drennan - Journal of Biological Chemistry, 2015 - ASBMB
S-Adenosylmethionine (SAM, also known as AdoMet) radical enzymes use SAM and a [4Fe-
4S] cluster to catalyze a diverse array of reactions. They adopt a partial triose-phosphate …
4S] cluster to catalyze a diverse array of reactions. They adopt a partial triose-phosphate …
Biosynthesis of 3-thia-α-amino acids on a carrier peptide
Y Yu, WA van der Donk - Proceedings of the National …, 2022 - National Acad Sciences
A subset of natural products, such as polyketides and nonribosomal peptides, is
biosynthesized while tethered to a carrier peptide via a thioester linkage. Recently, we …
biosynthesized while tethered to a carrier peptide via a thioester linkage. Recently, we …
Biological Systems Discovery In Silico: Radical S-Adenosylmethionine Protein Families and Their Target Peptides for Posttranslational Modification
Data mining methods in bioinformatics and comparative genomics commonly rely on
working definitions of protein families from prior computation. Partial phylogenetic profiling …
working definitions of protein families from prior computation. Partial phylogenetic profiling …
[HTML][HTML] Radical SAM enzymes in the biosynthesis of ribosomally synthesized and post-translationally modified peptides (RiPPs)
A Benjdia, C Balty, O Berteau - Frontiers in chemistry, 2017 - frontiersin.org
Ribosomally-synthesized and post-translationally modified peptides (RiPPs) are a large and
diverse family of natural products. They possess interesting biological properties such as …
diverse family of natural products. They possess interesting biological properties such as …