Gut microbiota in colorectal cancer development and therapy
Colorectal cancer (CRC) is one of the commonest cancers globally. A unique aspect of CRC
is its intimate association with the gut microbiota, which forms an essential part of the tumour …
is its intimate association with the gut microbiota, which forms an essential part of the tumour …
Innovations to culturing the uncultured microbial majority
Despite the surge of microbial genome data, experimental testing is important to confirm
inferences about the cell biology, ecological roles and evolution of microorganisms. As the …
inferences about the cell biology, ecological roles and evolution of microorganisms. As the …
High-throughput microbial culturomics using automation and machine learning
Pure bacterial cultures remain essential for detailed experimental and mechanistic studies in
microbiome research, and traditional methods to isolate individual bacteria from complex …
microbiome research, and traditional methods to isolate individual bacteria from complex …
[HTML][HTML] Fungal mycobiome drives IL-33 secretion and type 2 immunity in pancreatic cancer
A Alam, E Levanduski, P Denz, HS Villavicencio… - Cancer cell, 2022 - cell.com
TH 2 cells and innate lymphoid cells 2 (ILC2) can stimulate tumor growth by secreting pro-
tumorigenic cytokines such as interleukin-4 (IL-4), IL-5, and IL-13. However, the …
tumorigenic cytokines such as interleukin-4 (IL-4), IL-5, and IL-13. However, the …
Single-cell approaches in human microbiome research
V Lloréns-Rico, JA Simcock, GRB Huys, J Raes - Cell, 2022 - cell.com
Microbial culturing and meta-omic profiling technologies have significantly advanced our
understanding of the taxonomic and functional variation of the human microbiome and its …
understanding of the taxonomic and functional variation of the human microbiome and its …
Sequencing-based analysis of microbiomes
Microbiomes occupy a range of niches and, in addition to having diverse compositions, they
have varied functional roles that have an impact on agriculture, environmental sciences, and …
have varied functional roles that have an impact on agriculture, environmental sciences, and …
Genome-centric metagenomic insights into the role of Chloroflexi in anammox, activated sludge and methanogenic reactors
P Bovio-Winkler, LD Guerrero, L Erijman, P Oyarzúa… - BMC microbiology, 2023 - Springer
Abstract Background The phylum Chloroflexi is highly abundant in a wide variety of
wastewater treatment bioreactors. It has been suggested that they play relevant roles in …
wastewater treatment bioreactors. It has been suggested that they play relevant roles in …
Recent progress in high-throughput droplet screening and sorting for bioanalysis
G Sun, L Qu, F Azi, Y Liu, J Li, X Lv, G Du… - Biosensors and …, 2023 - Elsevier
Owing to its ability to isolate single cells and perform high-throughput sorting, droplet sorting
has been widely applied in several research fields. Compared with flow cytometry, droplet …
has been widely applied in several research fields. Compared with flow cytometry, droplet …
Harnessing the power of model organisms to unravel microbial functions in the coral holobiont
Stony corals build the framework of coral reefs, ecosystems of immense ecological and
economic importance. The existence of these ecosystems is threatened by climate change …
economic importance. The existence of these ecosystems is threatened by climate change …
Taxonomic and environmental distribution of bacterial amino acid auxotrophies
J Ramoneda, TBN Jensen, MN Price… - Nature …, 2023 - nature.com
Many microorganisms are auxotrophic—unable to synthesize the compounds they require
for growth. With this work, we quantify the prevalence of amino acid auxotrophies across a …
for growth. With this work, we quantify the prevalence of amino acid auxotrophies across a …