Motif kernel generated by genetic programming improves remote homology and fold detection
T Håndstad, AJH Hestnes, P Sætrom - BMC bioinformatics, 2007 - Springer
Background Protein remote homology detection is a central problem in computational
biology. Most recent methods train support vector machines to discriminate between related …
biology. Most recent methods train support vector machines to discriminate between related …
Computational peptide discovery with a genetic programming approach
The development of peptides for therapeutic targets or biomarkers for disease diagnosis is a
challenging task in protein engineering. Current approaches are tedious, often time …
challenging task in protein engineering. Current approaches are tedious, often time …
Using genetic programming to predict and optimize protein function
Protein engineers conventionally use tools such as Directed Evolution to find new proteins
with better functionalities and traits. More recently, computational techniques and especially …
with better functionalities and traits. More recently, computational techniques and especially …
Motif finding using ant colony optimization
S Bouamama, A Boukerram… - Swarm Intelligence: 7th …, 2010 - Springer
A challenging problem in molecular biology is the identification of the specific binding sites
of transcription factors in the promoter regions of genes referred to as motifs. This paper …
of transcription factors in the promoter regions of genes referred to as motifs. This paper …
Learning of glycan motifs using genetic programming and various fitness functions
T Miyahara, T Kuboyama - Journal of Advanced Computational …, 2014 - jstage.jst.go.jp
We apply a genetic programming approach to learning of glycan motifs by using tag tree
patterns and various fitness functions. Tag tree patterns obtained from some glycan data …
patterns and various fitness functions. Tag tree patterns obtained from some glycan data …
Genomic and proteomic databases: Foundations, current status and future applications
SB Navathe, U Patil, W Guan - Journal of Computing Science and …, 2007 - koreascience.kr
In this paper we have provided an extensive survey of the databases and other resources
related to the current research in bioinformatics and the issues that confront the database …
related to the current research in bioinformatics and the issues that confront the database …
[PDF][PDF] Strategy based genetic algorithms approach in automated GUI testing
N Stoyanov - 2020 - research.tue.nl
GUI testing is often a human executed and expensive process. Thus, a lot of directions are
explored in order to automate it. One of those directions is using completely automated tools …
explored in order to automate it. One of those directions is using completely automated tools …
Computational peptide discovery with a genetic programming approach
Background The development of peptides for therapeutic targets or biomarkers for disease
diagnosis is a challenging task in protein engineering. Current approaches are tedious …
diagnosis is a challenging task in protein engineering. Current approaches are tedious …
Comparison and fusion model in protein motifs
J Altamiranda, J Aguilar… - 2013 XXXIX Latin …, 2013 - ieeexplore.ieee.org
Motifs are useful in biology to highlight the nucleotides/amino-acids that are involved in
structure, function, regulation and evolution, or to infer homology between genes/proteins …
structure, function, regulation and evolution, or to infer homology between genes/proteins …
A context-aware fitness function based on feature selection for evolutionary learning of characteristic graph patterns
F Tokuhara, T Miyahara, T Kuboyama, Y Suzuki… - … and Database Systems …, 2017 - Springer
We propose a context-aware fitness function based on feature selection for evolutionary
learning of characteristic graph patterns. The proposed fitness function estimates the fitness …
learning of characteristic graph patterns. The proposed fitness function estimates the fitness …