Molecular and evolutionary determinants of bacteriophage host range

PA de Jonge, FL Nobrega, SJJ Brouns, BE Dutilh - Trends in microbiology, 2019 - cell.com
The host range of a bacteriophage is the taxonomic diversity of hosts it can successfully
infect. Host range, one of the central traits to understand in phages, is determined by a range …

Revisiting the rules of life for viruses of microorganisms

AMS Correa, C Howard-Varona, SR Coy… - Nature Reviews …, 2021 - nature.com
Viruses that infect microbial hosts have traditionally been studied in laboratory settings with
a focus on either obligate lysis or persistent lysogeny. In the environment, these infection …

Mesophilic and thermophilic viruses are associated with nutrient cycling during hyperthermophilic composting

H Liao, C Liu, C Ai, T Gao, QE Yang, Z Yu… - The ISME …, 2023 - academic.oup.com
While decomposition of organic matter by bacteria plays a major role in nutrient cycling in
terrestrial ecosystems, the significance of viruses remains poorly understood. Here we …

[HTML][HTML] Prokaryotic viruses impact functional microorganisms in nutrient removal and carbon cycle in wastewater treatment plants

Y Chen, Y Wang, D Paez-Espino, MF Polz… - Nature …, 2021 - nature.com
As one of the largest biotechnological applications, activated sludge (AS) systems in
wastewater treatment plants (WWTPs) harbor enormous viruses, with 10-1,000-fold higher …

Phage-specific metabolic reprogramming of virocells

C Howard-Varona, MM Lindback, GE Bastien… - The ISME …, 2020 - academic.oup.com
Ocean viruses are abundant and infect 20–40% of surface microbes. Infected cells, termed
virocells, are thus a predominant microbial state. Yet, virocells and their ecosystem impacts …

[PDF][PDF] Virome diversity correlates with intestinal microbiome diversity in adult monozygotic twins

JL Moreno-Gallego, SP Chou, SC Di Rienzi… - Cell host & …, 2019 - cell.com
The virome is one of the most variable components of the human gut microbiome. Within
twin pairs, viromes have been shown to be similar for infants, but not for adults, indicating …

[HTML][HTML] Global overview and major challenges of host prediction methods for uncultivated phages

C Coclet, S Roux - Current Opinion in Virology, 2021 - Elsevier
Highlights•Global phage diversity is now primarily explored through cultivation-independent
metagenomics.•Metagenome-derived phages are typically linked to their host (s) via in silico …

Integrating viral metagenomics into an ecological framework

P Sommers, A Chatterjee, A Varsani… - Annual review of …, 2021 - annualreviews.org
Viral metagenomics has expanded our knowledge of the ecology of uncultured viruses,
within both environmental (eg, terrestrial and aquatic) and host-associated (eg, plants and …

MetaHiC phage-bacteria infection network reveals active cycling phages of the healthy human gut

M Marbouty, A Thierry, GA Millot, R Koszul - Elife, 2021 - elifesciences.org
Bacteriophages play important roles in regulating the intestinal human microbiota
composition, dynamics, and homeostasis, and characterizing their bacterial hosts is needed …

Defining the human gut host–phage network through single-cell viral tagging

M Džunková, SJ Low, JN Daly, L Deng, C Rinke… - Nature …, 2019 - nature.com
Viral discovery is accelerating at an unprecedented rate due to continuing advances in
culture-independent sequence-based analyses. One important facet of this discovery is …