[HTML][HTML] The origin, source, and cycling of methane in deep crystalline rock biosphere
R Kietäväinen, L Purkamo - Frontiers in microbiology, 2015 - frontiersin.org
The emerging interest in using stable bedrock formations for industrial purposes, eg, nuclear
waste disposal, has increased the need for understanding microbiological and geochemical …
waste disposal, has increased the need for understanding microbiological and geochemical …
Discovery, production and modification of five novel lantibiotics using the promiscuous nisin modification machinery
AJ van Heel, TG Kloosterman… - ACS synthetic …, 2016 - ACS Publications
To find the right conditions to isolate natively expressed antimicrobial peptides from a wide
range of different microorganisms can be a challenge. Here, we exploited a heterologous …
range of different microorganisms can be a challenge. Here, we exploited a heterologous …
Blue: correcting sequencing errors using consensus and context
P Greenfield, K Duesing, A Papanicolaou… - …, 2014 - academic.oup.com
Motivation: Bioinformatics tools, such as assemblers and aligners, are expected to produce
more accurate results when given better quality sequence data as their starting point. This …
more accurate results when given better quality sequence data as their starting point. This …
Heterotrophic communities supplied by ancient organic carbon predominate in deep Fennoscandian bedrock fluids
The deep subsurface hosts diverse life, but the mechanisms that sustain this diversity remain
elusive. Here, we studied microbial communities involved in carbon cycling in deep, dark …
elusive. Here, we studied microbial communities involved in carbon cycling in deep, dark …
The Coal Seam Microbiome (CSMB) reference set, a lingua franca for the microbial coal-to-methane community
Microbial generation of methane from organic matter in coal represents an opportunity to
improve environmental and economic outcomes of coal seam gas production. This has …
improve environmental and economic outcomes of coal seam gas production. This has …
[HTML][HTML] A bacterial riboswitch class for the thiamin precursor HMP-PP employs a terminator-embedded aptamer
RM Atilho, G Mirihana Arachchilage, EB Greenlee… - Elife, 2019 - elifesciences.org
We recently implemented a bioinformatics pipeline that can uncover novel, but rare,
riboswitch candidates as well as other noncoding RNA structures in bacteria. A prominent …
riboswitch candidates as well as other noncoding RNA structures in bacteria. A prominent …
[HTML][HTML] Capturing prokaryotic dark matter genomes
C Gasc, C Ribière, N Parisot, R Beugnot, C Defois… - Research in …, 2015 - Elsevier
Prokaryotes are the most diverse and abundant cellular life forms on Earth. Most of them,
identified by indirect molecular approaches, belong to microbial dark matter. The advent of …
identified by indirect molecular approaches, belong to microbial dark matter. The advent of …
Who eats what? Unravelling microbial conversion of coal to methane
Microbial communities in subsurface coal seams are responsible for the conversion of coal
organic matter to methane. This process has important implications for both energy …
organic matter to methane. This process has important implications for both energy …
[HTML][HTML] The structure of MadC from Clostridium maddingley reveals new insights into class I lanthipeptide cyclases
CV Knospe, M Kamel, O Spitz, A Hoeppner… - Frontiers in …, 2023 - frontiersin.org
The rapid emergence of microbial multi-resistance against antibiotics has led to intense
search for alternatives. One of these alternatives are ribosomally synthesized and post …
search for alternatives. One of these alternatives are ribosomally synthesized and post …
Krumholzibacteriota and Deltaproteobacteria contain rare genetic potential to liberate carbon from monoaromatic compounds in subsurface coal seams
Biogenic methane in subsurface coal seam environments is produced by diverse consortia
of microbes. Although this methane is useful for global energy security, it remains unclear …
of microbes. Although this methane is useful for global energy security, it remains unclear …