Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editors
The development of new CRISPR–Cas genome editing tools continues to drive major
advances in the life sciences. Four classes of CRISPR–Cas-derived genome editing agents …
advances in the life sciences. Four classes of CRISPR–Cas-derived genome editing agents …
Base editing: precision chemistry on the genome and transcriptome of living cells
RNA-guided programmable nucleases from CRISPR systems generate precise breaks in
DNA or RNA at specified positions. In cells, this activity can lead to changes in DNA …
DNA or RNA at specified positions. In cells, this activity can lead to changes in DNA …
Adenine transversion editors enable precise, efficient A• T-to-C• G base editing in mammalian cells and embryos
L Chen, M Hong, C Luan, H Gao, G Ru, X Guo… - Nature …, 2024 - nature.com
Base editors have substantial promise in basic research and as therapeutic agents for the
correction of pathogenic mutations. The development of adenine transversion editors has …
correction of pathogenic mutations. The development of adenine transversion editors has …
Programmable base editing of A• T to G• C in genomic DNA without DNA cleavage
The spontaneous deamination of cytosine is a major source of transitions from C• G to T• A
base pairs, which account for half of known pathogenic point mutations in humans. The …
base pairs, which account for half of known pathogenic point mutations in humans. The …
CRISPR technologies for genome, epigenome and transcriptome editing
Our ability to edit genomes lags behind our capacity to sequence them, but the growing
understanding of CRISPR biology and its application to genome, epigenome and …
understanding of CRISPR biology and its application to genome, epigenome and …
Determinants of base editing outcomes from target library analysis and machine learning
Although base editors are widely used to install targeted point mutations, the factors that
determine base editing outcomes are not well understood. We characterized sequence …
determine base editing outcomes are not well understood. We characterized sequence …
Base excision repair
HE Krokan, M Bjørås - Cold Spring Harbor perspectives …, 2013 - cshperspectives.cshlp.org
Base excision repair (BER) corrects DNA damage from oxidation, deamination and
alkylation. Such base lesions cause little distortion to the DNA helix structure. BER is …
alkylation. Such base lesions cause little distortion to the DNA helix structure. BER is …
Breakage of cytoplasmic chromosomes by pathological DNA base excision repair
Chromothripsis is a catastrophic mutational process that promotes tumorigenesis and
causes congenital disease,,–. Chromothripsis originates from aberrations of nuclei called …
causes congenital disease,,–. Chromothripsis originates from aberrations of nuclei called …
Advances in quantum dot-based biosensors for DNA-modifying enzymes assay
Q Zhang, X Zhang, F Ma, C Zhang - Coordination Chemistry Reviews, 2022 - Elsevier
DNA-modifying enzymes participate in various genetic functions (eg, DNA replication,
repairing, and recombination) through alternating certain DNA sequence, and the …
repairing, and recombination) through alternating certain DNA sequence, and the …
[HTML][HTML] Base excision repair of oxidative DNA damage: from mechanism to disease
AM Whitaker, MA Schaich, MS Smith… - Frontiers in …, 2017 - ncbi.nlm.nih.gov
Reactive oxygen species continuously assault the structure of DNA resulting in oxidation
and fragmentation of the nucleobases. Both oxidative DNA damage itself and its repair …
and fragmentation of the nucleobases. Both oxidative DNA damage itself and its repair …