PhyloBench: a Benchmark for Evaluating Phylogenetic Programs

S Spirin, A Sigorskikh, A Efremov… - Molecular Biology …, 2024 - academic.oup.com
Motivation Phylogenetic inference based on protein sequence alignment is a widely used
procedure. Numerous phylogenetic algorithms have been developed, most of which have …

Estimation of relative effectiveness of phylogenetic programs by machine learning

M Krivozubov, F Goebels, S Spirin - Journal of Bioinformatics and …, 2014 - World Scientific
Reconstruction of phylogeny of a protein family from a sequence alignment can produce
results of different quality. Our goal is to predict the quality of phylogeny reconstruction …