D-amino acids and D-amino acid-containing peptides: potential disease biomarkers and therapeutic targets?

M Abdulbagi, L Wang, O Siddig, B Di, B Li - Biomolecules, 2021 - mdpi.com
In nature, amino acids are found in two forms, L and D enantiomers, except for glycine which
does not have a chiral center. The change of one form to the other will lead to a change in …

Principles of electron capture and transfer dissociation mass spectrometry applied to peptide and protein structure analysis

KO Zhurov, L Fornelli, MD Wodrich… - Chemical Society …, 2013 - pubs.rsc.org
This tutorial review describes the principles and practices of electron capture and transfer
dissociation (ECD/ETD or ExD) mass spectrometry (MS) employed for peptide and protein …

Peptide radicals and cation radicals in the gas phase

F Turecek, RR Julian - Chemical reviews, 2013 - ACS Publications
For about three decades, the chemistry of cation radicals derived from organic molecules
had received a major impetus from mass spectrometry. This was because cation radicals …

Analysis of peptide stereochemistry in single cells by capillary electrophoresis–trapped ion mobility spectrometry mass spectrometry

DH Mast, HW Liao, EV Romanova… - Analytical …, 2021 - ACS Publications
Single cell analysis strives to probe molecular heterogeneity in morphologically similar cell
populations through quantitative or qualitative measurements of genetic, proteomic, or …

Deamidation: Differentiation of aspartyl from isoaspartyl products in peptides by electron capture dissociation

JJ Cournoyer, JL Pittman, VB Ivleva, E Fallows… - Protein …, 2005 - Wiley Online Library
Deamidation of asparaginyl and isomerization of aspartyl residues in proteins proceed
through a succinimide intermediate producing a mixture of aspartyl and isoaspartyl residues …

Evidence for many resolvable structures within conformation types of electrosprayed ubiquitin ions

SL Koeniger, SI Merenbloom… - The Journal of Physical …, 2006 - ACS Publications
A new two-dimensional ion mobility spectrometry approach combined with mass
spectrometry has been used to examine ubiquitin ions in the gas phase. In this approach …

Site-Specific Characterization of d-Amino Acid Containing Peptide Epimers by Ion Mobility Spectrometry

C Jia, CB Lietz, Q Yu, L Li - Analytical chemistry, 2014 - ACS Publications
Traditionally, the d-amino acid containing peptide (DAACP) candidate can be discovered by
observing the differences of biological activity and chromatographic retention time between …

Fast and Effective Ion Mobility–Mass Spectrometry Separation of d-Amino-Acid-Containing Peptides

K Jeanne Dit Fouque, A Garabedian, J Porter… - Analytical …, 2017 - ACS Publications
Despite often minute concentrations in vivo, d-amino acid containing peptides (DAACPs) are
crucial to many life processes. Standard proteomics protocols fail to detect them as d/l …

A d-Amino Acid-Containing Neuropeptide Discovery Funnel

I Livnat, HC Tai, ET Jansson, L Bai… - Analytical …, 2016 - ACS Publications
A receptor binding class of d-amino acid-containing peptides (DAACPs) is formed in animals
from an enzymatically mediated post-translational modification of ribosomally translated all-l …

Electron Transfer Ion/Ion Reactions in a Three-Dimensional Quadrupole Ion Trap:  Reactions of Doubly and Triply Protonated Peptides with SO2-

SJ Pitteri, PA Chrisman, JM Hogan… - Analytical …, 2005 - ACS Publications
Ion− ion reactions between a variety of peptide cations (doubly and triply charged) and SO2
anions have been studied in a 3-D quadrupole ion trap, resulting in proton and electron …