[HTML][HTML] Potential use of microbial community genomes in various dimensions of agriculture productivity and its management: a review

MA Iquebal, J Jagannadham, S Jaiswal… - Frontiers in …, 2022 - frontiersin.org
Agricultural productivity is highly influenced by its associated microbial community. With
advancements in omics technology, metagenomics is known to play a vital role in microbial …

[HTML][HTML] Current Status of Omics in Biological Quality Elements for Freshwater Biomonitoring

J Machuca-Sepúlveda, J Miranda, N Lefin, A Pedroso… - Biology, 2023 - mdpi.com
Simple Summary Freshwater ecosystems face various threats, especially in recent decades,
that pose unprecedented challenges to human health, water supply, agriculture, forestry …

[HTML][HTML] Spatio-temporal connectivity of the aquatic microbiome associated with cyanobacterial blooms along a Great Lake riverine-lacustrine continuum

S Crevecoeur, TA Edge, LC Watson… - Frontiers in …, 2023 - frontiersin.org
Lake Erie is subject to recurring events of cyanobacterial harmful algal blooms (cHABs), but
measures of nutrients and total phytoplankton biomass seem to be poor predictors of cHABs …

[HTML][HTML] Identification of potential microbial risk factors associated with fecal indicator exceedances at recreational beaches

F Saleem, E Li, TA Edge, KL Tran… - Environmental …, 2024 - Springer
Background Fecal bacterial densities are proxy indicators of beach water quality, and beach
posting decisions are made based on Beach Action Value (BAV) exceedances for a beach …

Soil exposed to silver nanoparticles reveals significant changes in community structure and altered microbial transcriptional profiles

MJ Meier, AE Dodge, AD Samarajeewa… - Environmental …, 2020 - Elsevier
Anthropogenic activities can disrupt soil ecosystems, normally resulting in reduced soil
microbial health. Regulatory agencies need to determine the effects of uncharacterized …

[HTML][HTML] All boreal forest successional stages needed to maintain the full suite of soil biodiversity, community composition, and function following wildfire

TM Porter, E Smenderovac, D Morris, L Venier - Scientific Reports, 2023 - nature.com
Wildfire is a natural disturbance in boreal forest systems that has been predicted to increase
in frequency, intensity, and extent due to climate change. Most studies tend to assess the …

[HTML][HTML] Cutting edge tools in the field of soil microbiology

D Garg, N Patel, A Rawat, AS Rosado - Current Research in Microbial …, 2024 - Elsevier
The study of the whole of the genetic material contained within the microbial populations
found in a certain environment is made possible by metagenomics. This technique enables …

[HTML][HTML] MetaWorks: A flexible, scalable bioinformatic pipeline for high-throughput multi-marker biodiversity assessments

TM Porter, M Hajibabaei - PLoS One, 2022 - journals.plos.org
Multi-marker metabarcoding is increasingly being used to generate biodiversity information
across different domains of life from microbes to fungi to animals such as for molecular …

[HTML][HTML] Rapid on-site detection of harmful algal blooms: real-time cyanobacteria identification using Oxford Nanopore sequencing

M Potvin, J Gauthier, C Langevin, V Mohit… - Frontiers in …, 2023 - frontiersin.org
With the increasing occurrence and severity of cyanobacterial harmful algal blooms (cHAB)
at the global scale, there is an urgent need for rapid, accurate, accessible, and cost-effective …

Emerging priorities for microbial metagenome research

R Kirubakaran, KN ArulJothi, S Revathi… - Bioresource Technology …, 2020 - Elsevier
Overwhelming anthropogenic activities lead to deterioration of natural resources and the
environment. The microorganisms are considered desirable, due to their suitability for easy …