Opportunities and challenges for ChatGPT and large language models in biomedicine and health

S Tian, Q Jin, L Yeganova, PT Lai, Q Zhu… - Briefings in …, 2024 - academic.oup.com
ChatGPT has drawn considerable attention from both the general public and domain experts
with its remarkable text generation capabilities. This has subsequently led to the emergence …

Transformer models used for text-based question answering systems

K Nassiri, M Akhloufi - Applied Intelligence, 2023 - Springer
The question answering system is frequently applied in the area of natural language
processing (NLP) because of the wide variety of applications. It consists of answering …

Genegpt: Augmenting large language models with domain tools for improved access to biomedical information

Q Jin, Y Yang, Q Chen, Z Lu - Bioinformatics, 2024 - academic.oup.com
Motivation While large language models (LLMs) have been successfully applied to various
tasks, they still face challenges with hallucinations. Augmenting LLMs with domain-specific …

BioBART: Pretraining and evaluation of a biomedical generative language model

H Yuan, Z Yuan, R Gan, J Zhang, Y Xie… - arXiv preprint arXiv …, 2022 - arxiv.org
Pretrained language models have served as important backbones for natural language
processing. Recently, in-domain pretraining has been shown to benefit various domain …

Augmenting black-box llms with medical textbooks for clinical question answering

Y Wang, X Ma, W Chen - arXiv preprint arXiv:2309.02233, 2023 - arxiv.org
Large-scale language models (LLMs), such as ChatGPT, are capable of generating human-
like responses for various downstream tasks, such as task-oriented dialogues and question …

[HTML][HTML] Matching patients to clinical trials with large language models

Q Jin, Z Wang, CS Floudas, F Chen, C Gong… - ArXiv, 2023 - ncbi.nlm.nih.gov
Clinical trials are often hindered by the challenge of patient recruitment. In this work, we
introduce TrialGPT, a first-of-its-kind large language model (LLM) framework to assist patient …

BioASQ-QA: A manually curated corpus for Biomedical Question Answering

A Krithara, A Nentidis, K Bougiatiotis, G Paliouras - Scientific Data, 2023 - nature.com
The BioASQ question answering (QA) benchmark dataset contains questions in English,
along with golden standard (reference) answers and related material. The dataset has been …

Multi-hop question answering

V Mavi, A Jangra, A Jatowt - Foundations and Trends® in …, 2024 - nowpublishers.com
Abstract The task of Question Answering (QA) has attracted significant research interest for a
long time. Its relevance to language understanding and knowledge retrieval tasks, along …

Large language models in biomedical natural language processing: benchmarks, baselines, and recommendations

Q Chen, J Du, Y Hu, V Kuttichi Keloth, X Peng… - arXiv e …, 2023 - ui.adsabs.harvard.edu
Biomedical literature is growing rapidly, making it challenging to curate and extract
knowledge manually. Biomedical natural language processing (BioNLP) techniques that …

BioInstruct: instruction tuning of large language models for biomedical natural language processing

H Tran, Z Yang, Z Yao, H Yu - Journal of the American Medical …, 2024 - academic.oup.com
Objectives To enhance the performance of large language models (LLMs) in biomedical
natural language processing (BioNLP) by introducing a domain-specific instruction dataset …