Paxillin: A hub for mechano-transduction from the β3 integrin-talin-kindlin axis

M Ripamonti, B Wehrle-Haller… - Frontiers in Cell and …, 2022 - frontiersin.org
Focal adhesions are specialized integrin-dependent adhesion complexes, which ensure cell
anchoring to the extracellular matrix. Focal adhesions also function as mechano-signaling …

miRCOVID-19: potential targets of human miRNAs in SARS-CoV-2 for RNA-based drug discovery

T Alam, L Lipovich - Non-coding RNA, 2021 - mdpi.com
Sense-antisense interactions of long and short RNAs in human cells are integral to post-
transcriptional gene regulation, in particular that of mRNAs by microRNAs. Many viruses …

Topological features of integrin adhesion complexes revealed by multiplexed proximity biotinylation

MR Chastney, C Lawless, JD Humphries… - Journal of Cell …, 2020 - rupress.org
Integrin adhesion complexes (IACs) bridge the extracellular matrix to the actin cytoskeleton
and transduce signals in response to both chemical and mechanical cues. The composition …

Deep learning in LncRNAome: contribution, challenges, and perspectives

T Alam, HRH Al-Absi, S Schmeier - Non-coding RNA, 2020 - mdpi.com
Long non-coding RNAs (lncRNA), the pervasively transcribed part of the mammalian
genome, have played a significant role in changing our protein-centric view of genomes …

The structural basis of the talin–KANK1 interaction that coordinates the actin and microtubule cytoskeletons at focal adhesions

X Li, BT Goult, C Ballestrem… - Open …, 2023 - royalsocietypublishing.org
Adhesion between cells and the extracellular matrix is mediated by heterodimeric (αβ)
integrin receptors that are intracellularly linked to the contractile actomyosin machinery. One …

LNCRI: Long Non-Coding RNA Identifier in Multiple Species

S Musleh, MT Islam, T Alam - IEEE Access, 2021 - ieeexplore.ieee.org
The pervasive nature of long non-coding RNA (lncRNA) transcription in the mammalian
genomes has changed our protein-centric view of genomes. But the identification of …

Definition of the fibroblast adhesome using multiplexed proximity biotinylation

MR Chastney, C Lawless, JD Humphries, S Warwood… - bioRxiv, 2020 - biorxiv.org
Integrin adhesion complexes (IACs) bridge the extracellular matrix to the actin cytoskeleton
and transduce signals in response to both chemical and mechanical cues. The composition …

The purified recombinant FAT domain of the Focal Adhesion Kinase does not bind directly to recombinant Talin or MBD2 in vitro

R Naser, AA Momin, AJ Ali, J Merzaban, ST Arold - bioRxiv, 2022 - biorxiv.org
Controlled localization and activation of the focal adhesion kinase (FAK) functionally links
adhesion, migration and survival of the cell. The C-terminal focal adhesion targeting (FAT) …

Recognition of LD motifs by the focal adhesion targeting domains of focal adhesion kinase and proline‐rich tyrosine kinase 2‐beta: Insights from molecular dynamics …

E Michael, S Polydorides… - Proteins: Structure …, 2021 - Wiley Online Library
The focal adhesion kinase (FAK) and the proline‐rich tyrosine kinase 2‐beta (PYK2) are
implicated in cancer progression and metastasis and represent promising biomarkers and …

[PDF][PDF] Molecular Insights into the Mechanism and Dynamics of Paxillin Binding to Focal Adhesions by Fluorescence Imaging Approaches

M RIPAMONTI - access.archive-ouverte.unige.ch
The organization of individual cells into functional tissues and organs is the outcome of a
multitude of cell-cell and cell-extracellular matrix (ECM) adhesive interactions (Winograd …