Nonlinear control of transcription through enhancer–promoter interactions
Chromosome structure in mammals is thought to regulate transcription by modulating three-
dimensional interactions between enhancers and promoters, notably through CTCF …
dimensional interactions between enhancers and promoters, notably through CTCF …
Fate mapping of human glioblastoma reveals an invariant stem cell hierarchy
Human glioblastomas harbour a subpopulation of glioblastoma stem cells that drive
tumorigenesis. However, the origin of intratumoural functional heterogeneity between …
tumorigenesis. However, the origin of intratumoural functional heterogeneity between …
Single-molecule DNA amplification and analysis using microfluidics
C Zhang, D Xing - Chemical reviews, 2010 - ACS Publications
The broad availability of amplified DNA molecules enabled the development of many
powerful applications in molecular biology techniques. Currently, a variety of DNA …
powerful applications in molecular biology techniques. Currently, a variety of DNA …
Identification and characterization of essential genes in the human genome
Large-scale genetic analysis of lethal phenotypes has elucidated the molecular
underpinnings of many biological processes. Using the bacterial clustered regularly …
underpinnings of many biological processes. Using the bacterial clustered regularly …
Variable clonal repopulation dynamics influence chemotherapy response in colorectal cancer
Intratumoral heterogeneity arises through the evolution of genetically diverse subclones
during tumor progression. However, it remains unknown whether cells within single genetic …
during tumor progression. However, it remains unknown whether cells within single genetic …
Cancer gene discovery: exploiting insertional mutagenesis
M Ranzani, S Annunziato, DJ Adams, E Montini - Molecular cancer research, 2013 - AACR
Insertional mutagenesis has been used as a functional forward genetics screen for the
identification of novel genes involved in the pathogenesis of human cancers. Different …
identification of novel genes involved in the pathogenesis of human cancers. Different …
In vivo CRISPR screening in CD8 T cells with AAV–Sleeping Beauty hybrid vectors identifies membrane targets for improving immunotherapy for glioblastoma
Targeting membrane proteins could improve the efficacy of T cell–based immunotherapies.
To facilitate the identification of T cell targets, we developed a hybrid genetic screening …
To facilitate the identification of T cell targets, we developed a hybrid genetic screening …
Targeted sequencing by proximity ligation for comprehensive variant detection and local haplotyping
Despite developments in targeted gene sequencing and whole-genome analysis
techniques, the robust detection of all genetic variation, including structural variants, in and …
techniques, the robust detection of all genetic variation, including structural variants, in and …
The deubiquitinase USP9X suppresses pancreatic ductal adenocarcinoma
PA Pérez-Mancera, AG Rust, L Van Der Weyden… - Nature, 2012 - nature.com
Pancreatic ductal adenocarcinoma (PDA) remains a lethal malignancy despite much
progress concerning its molecular characterization. PDA tumours harbour four signature …
progress concerning its molecular characterization. PDA tumours harbour four signature …
The TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries
L Barquist, M Mayho, C Cummins, AK Cain… - …, 2016 - academic.oup.com
Transposon insertion sequencing is a high-throughput technique for assaying large libraries
of otherwise isogenic transposon mutants providing insight into gene essentiality, gene …
of otherwise isogenic transposon mutants providing insight into gene essentiality, gene …