[HTML][HTML] Tools for genetic studies in experimental populations of polyploids
Polyploid organisms carry more than two copies of each chromosome, a condition rarely
tolerated in animals but which occurs relatively frequently in the plant kingdom. One of the …
tolerated in animals but which occurs relatively frequently in the plant kingdom. One of the …
[HTML][HTML] Using linkage maps to correct and scaffold de novo genome assemblies: methods, challenges, and computational tools
JL Fierst - Frontiers in genetics, 2015 - frontiersin.org
Modern high-throughput DNA sequencing has made it possible to inexpensively produce
genome sequences, but in practice many of these draft genomes are fragmented and …
genome sequences, but in practice many of these draft genomes are fragmented and …
[HTML][HTML] GREENC: a Wiki-based database of plant lncRNAs
AP Gallart, AH Pulido, IAM de Lagrán… - Nucleic acids …, 2016 - ncbi.nlm.nih.gov
Long non-coding RNAs (lncRNAs) are functional non-translated molecules greater than 200
nt. Their roles are diverse and they are usually involved in transcriptional regulation …
nt. Their roles are diverse and they are usually involved in transcriptional regulation …
[HTML][HTML] Current status and trends in forest genomics
Forests are not only the most predominant of the Earth's terrestrial ecosystems, but are also
the core supply for essential products for human use. However, global climate change and …
the core supply for essential products for human use. However, global climate change and …
[HTML][HTML] GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane
TWA Balsalobre, G da Silva Pereira, GRA Margarido… - BMC genomics, 2017 - Springer
Abstract Background Sugarcane (Saccharum spp.) is predominantly an autopolyploid plant
with a variable ploidy level, frequent aneuploidy and a large genome that hampers …
with a variable ploidy level, frequent aneuploidy and a large genome that hampers …
GREENC: a Wiki-based database of plant lncRNAs
A Paytuví Gallart, A Hermoso Pulido… - Nucleic acids …, 2016 - academic.oup.com
Long non-coding RNAs (lncRNAs) are functional non-translated molecules greater than 200
nt. Their roles are diverse and they are usually involved in transcriptional regulation …
nt. Their roles are diverse and they are usually involved in transcriptional regulation …
RADseq approaches and applications for forest tree genetics
As tree species vary extensively in genome size, complexity, and resource development,
reduced representation methods have been increasingly employed for the generation of …
reduced representation methods have been increasingly employed for the generation of …
QTL mapping of downy and powdery mildew resistances in PI 197088 cucumber with genotyping-by-sequencing in RIL population
Y Wang, K VandenLangenberg, C Wen… - Theoretical and Applied …, 2018 - Springer
Key message Host resistances in PI 197088 cucumber to downy and powdery mildew
pathogens are conferred by 11 (3 with major effect) and 4 (1 major effect) QTL, respectively …
pathogens are conferred by 11 (3 with major effect) and 4 (1 major effect) QTL, respectively …
A high-density, multi-parental SNP genetic map on apple validates a new mapping approach for outcrossing species
Quantitative trait loci (QTL) mapping approaches rely on the correct ordering of molecular
markers along the chromosomes, which can be obtained from genetic linkage maps or a …
markers along the chromosomes, which can be obtained from genetic linkage maps or a …
[HTML][HTML] Landscape genomic prediction for restoration of a Eucalyptus foundation species under climate change
As species face rapid environmental change, we can build resilient populations through
restoration projects that incorporate predicted future climates into seed sourcing decisions …
restoration projects that incorporate predicted future climates into seed sourcing decisions …