Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress
Background Understanding ethanol tolerance in microorganisms is important for the
improvement of bioethanol production. Hence, we performed parallel-evolution experiments …
improvement of bioethanol production. Hence, we performed parallel-evolution experiments …
Transition from positive to neutral in mutation fixation along with continuing rising fitness in thermal adaptive evolution
T Kishimoto, L Iijima, M Tatsumi, N Ono, A Oyake… - PLoS …, 2010 - journals.plos.org
It remains to be determined experimentally whether increasing fitness is related to positive
selection, while stationary fitness is related to neutral evolution. Long-term laboratory …
selection, while stationary fitness is related to neutral evolution. Long-term laboratory …
Cooperative adaptation to establishment of a synthetic bacterial mutualism
K Hosoda, S Suzuki, Y Yamauchi, Y Shiroguchi… - PLoS …, 2011 - journals.plos.org
To understand how two organisms that have not previously been in contact can establish
mutualism, it is first necessary to examine temporal changes in their phenotypes during the …
mutualism, it is first necessary to examine temporal changes in their phenotypes during the …
Inference of transcriptome signatures of Escherichia coli in long-term stationary phase
S Takano, H Takahashi, Y Yama, R Miyazaki… - Scientific Reports, 2023 - nature.com
Abstract “Non-growing” is a dominant life form of microorganisms in nature, where available
nutrients and resources are limited. In laboratory culture systems, Escherichia coli can …
nutrients and resources are limited. In laboratory culture systems, Escherichia coli can …
[图书][B] Microarray technology in practice
S Russell, LA Meadows, RR Russell - 2008 - books.google.com
Using chips composed of thousands of spots, each with the capability of holding DNA
molecules corresponding to a given gene, DNA microarray technology has enabled …
molecules corresponding to a given gene, DNA microarray technology has enabled …
FederatedCloudSim: a SLA-aware federated cloud simulation framework
A Kohne, M Spohr, L Nagel, O Spinczyk - Proceedings of the 2nd …, 2014 - dl.acm.org
Recent developments show that the standardization of cloud service descriptions and
exchange leads the way for the rise of cloud federations. In these federations CSPs (cloud …
exchange leads the way for the rise of cloud federations. In these federations CSPs (cloud …
Phenotypic convergence in bacterial adaptive evolution to ethanol stress
Background Bacterial cells have a remarkable ability to adapt to environmental changes, a
phenomenon known as adaptive evolution. During adaptive evolution, phenotype and …
phenomenon known as adaptive evolution. During adaptive evolution, phenotype and …
Growth rate-coordinated transcriptome reorganization in bacteria
Background Cell growth rate reflects an organism's physiological state and largely relies on
the ability of gene expression to respond to the environment. The relationship between …
the ability of gene expression to respond to the environment. The relationship between …
Universal relationship in gene-expression changes for cells in steady-growth state
Cells adapt to different conditions by altering a vast number of components, which is
measurable using transcriptome analysis. Given that a cell undergoing steady growth is …
measurable using transcriptome analysis. Given that a cell undergoing steady growth is …
Multilevel comparative analysis of the contributions of genome reduction and heat shock to the Escherichia colitranscriptome
Background Both large deletions in genome and heat shock stress would lead to alterations
in the gene expression profile; however, whether there is any potential linkage between …
in the gene expression profile; however, whether there is any potential linkage between …