Molecular biology of bladder cancer: new insights into pathogenesis and clinical diversity

MA Knowles, CD Hurst - Nature reviews cancer, 2015 - nature.com
Urothelial carcinoma of the bladder comprises two long-recognized disease entities with
distinct molecular features and clinical outcome. Low-grade non-muscle-invasive tumours …

DNA methylation based biomarkers: practical considerations and applications

AH Kit, HM Nielsen, J Tost - Biochimie, 2012 - Elsevier
A biomarker is a molecular target analyzed in a qualitative or quantitative manner to detect
and diagnose the presence of a disease, to predict the outcome and the response to a …

[HTML][HTML] Circulating tumor cell clustering shapes DNA methylation to enable metastasis seeding

S Gkountela, F Castro-Giner, BM Szczerba, M Vetter… - Cell, 2019 - cell.com
The ability of circulating tumor cells (CTCs) to form clusters has been linked to increased
metastatic potential. Yet biological features and vulnerabilities of CTC clusters remain …

[HTML][HTML] DNA methylation age of human tissues and cell types

S Horvath - Genome biology, 2013 - Springer
Background It is not yet known whether DNA methylation levels can be used to accurately
predict age across a broad spectrum of human tissues and cell types, nor whether the …

[HTML][HTML] Bladder cancer molecular taxonomy: summary from a consensus meeting

SP Lerner, DJ McConkey, KA Hoadley… - Bladder …, 2016 - content.iospress.com
The advent of Omics technologies has been key to the molecular subclassification of
urothelial bladder cancer. Several groups have used different strategies to this aim, with …

[HTML][HTML] Changes in correlation between promoter methylation and gene expression in cancer

M Moarii, V Boeva, JP Vert, F Reyal - BMC genomics, 2015 - Springer
Background Methylation of high-density CpG regions known as CpG Islands (CGIs) has
been widely described as a mechanism associated with gene expression regulation …

Quantitative genome-wide methylation analysis of high-grade non-muscle invasive bladder cancer

MO Kitchen, RT Bryan, RD Emes, JR Glossop… - Epigenetics, 2016 - Taylor & Francis
High-grade non-muscle invasive bladder cancer (HG-NMIBC) is a clinically unpredictable
disease with greater risks of recurrence and progression relative to their low-intermediate …

The urothelial gene regulatory network: understanding biology to improve bladder cancer management

M Ramal, S Corral, M Kalisz, E Lapi, FX Real - Oncogene, 2024 - nature.com
The urothelium is a stratified epithelium composed of basal cells, one or more layers of
intermediate cells, and an upper layer of differentiated umbrella cells. Most bladder cancers …

Genome-wide DNA methylation analysis of lung carcinoma reveals one neuroendocrine and four adenocarcinoma epitypes associated with patient outcome

A Karlsson, M Jönsson, M Lauss, H Brunnström… - Clinical Cancer …, 2014 - AACR
Purpose: Lung cancer is the worldwide leading cause of death from cancer. DNA
methylation in gene promoter regions is a major mechanism of gene expression regulation …

[HTML][HTML] An integrated genomics analysis of epigenetic subtypes in human breast tumors links DNA methylation patterns to chromatin states in normal mammary cells

K Holm, J Staaf, M Lauss, M Aine, D Lindgren… - Breast Cancer …, 2016 - Springer
Background Aberrant DNA methylation is frequently observed in breast cancer. However,
the relationship between methylation patterns and the heterogeneity of breast cancer has …