Experimental design and data-analysis in label-free quantitative LC/MS proteomics: A tutorial with MSqRob
Label-free shotgun proteomics is routinely used to assess proteomes. However, extracting
relevant information from the massive amounts of generated data remains difficult. This …
relevant information from the massive amounts of generated data remains difficult. This …
A potential golden age to come—current tools, recent use cases, and future avenues for de novo sequencing in proteomics
In shotgun proteomics, peptide and protein identification is most commonly conducted using
database search engines, the method of choice when reference protein sequences are …
database search engines, the method of choice when reference protein sequences are …
Evaluating de novo sequencing in proteomics: already an accurate alternative to database-driven peptide identification?
While peptide identifications in mass spectrometry (MS)-based shotgun proteomics are
mostly obtained using database search methods, high-resolution spectrum data from …
mostly obtained using database search methods, high-resolution spectrum data from …
Antioxidative Effects and Mechanism Study of Bioactive Peptides from Defatted Walnut (Juglans regia L.) Meal Hydrolysate
J Sheng, X Yang, J Chen, T Peng, X Yin… - Journal of Agricultural …, 2019 - ACS Publications
The peptide components of defatted walnut (Juglans regia L.) meal hydrolysate (DWMH)
remain unclear, hindering the investigation of biological mechanisms and exploitation of …
remain unclear, hindering the investigation of biological mechanisms and exploitation of …
Identification of a novel peptide that activates alcohol dehydrogenase from crucian carp swim bladder and how it protects against acute alcohol-induced liver injury in …
Y Shi, F Yu, Y Wu, L Dai, Y Feng, S Chen… - … of Pharmaceutical and …, 2022 - Elsevier
Alcoholism is a severe threat to public health, and there are no adequate treatments for
alcoholic liver disease. The aim of this study was to identify bioactive peptides derived from …
alcoholic liver disease. The aim of this study was to identify bioactive peptides derived from …
Atmospheric and Room Temperature Plasma (ARTP) Mutagenesis Improved the Anti-MRSA Activity of Brevibacillus sp. SPR20
N Songnaka, M Lertcanawanichakul… - International Journal of …, 2023 - mdpi.com
Brevibacillus sp. SPR20 produced potentially antibacterial substances against methicillin-
resistant Staphylococcus aureus (MRSA). The synthesis of these substances is controlled by …
resistant Staphylococcus aureus (MRSA). The synthesis of these substances is controlled by …
Identification and enhancement of antioxidant P1-peptide isolated from Ganoderma lucidum hydrolysate
S Krobthong, Y Yingchutrakul - Food Biotechnology, 2020 - Taylor & Francis
Ganoderma lucidum is an edible fungus which typically used in functional food products
because of the potential enhancement of health. Many hydrolysates from G. lucidum exhibit …
because of the potential enhancement of health. Many hydrolysates from G. lucidum exhibit …
Extended Snake Venomics by Top-Down In-Source Decay: Investigating the Newly Discovered Anatolian Meadow Viper Subspecies, Vipera anatolica senliki
Herein, we report on the venom proteome of Vipera anatolica senliki, a recently discovered
and hitherto unexplored subspecies of the critically endangered Anatolian meadow viper …
and hitherto unexplored subspecies of the critically endangered Anatolian meadow viper …
Non-human peptides revealed in blood reflect the composition of intestinal microbiota
GP Arapidi, AS Urban, MS Osetrova, VO Shender… - BMC biology, 2024 - Springer
Background The previously underestimated effects of commensal gut microbiota on the
human body are increasingly being investigated using omics. The discovery of active …
human body are increasingly being investigated using omics. The discovery of active …
[HTML][HTML] Toxinology in the proteomics era: a review on arachnid venom proteomics
FC Marchi, E Mendes-Silva… - Journal of venomous …, 2022 - SciELO Brasil
The word venomics was coined to acknowledge the studies that use omics to investigate
venom proteins and peptides. Venomics has evolved considerably over the last 20 years …
venom proteins and peptides. Venomics has evolved considerably over the last 20 years …