A guide to 13C metabolic flux analysis for the cancer biologist

MR Antoniewicz - Experimental & molecular medicine, 2018 - nature.com
Cancer metabolism is significantly altered from normal cellular metabolism allowing cancer
cells to adapt to changing microenvironments and maintain high rates of proliferation. In the …

Stable isotopes of fatty acids: current and future perspectives for advancing trophic ecology

CW Twining, SJ Taipale, L Ruess… - … of the Royal …, 2020 - royalsocietypublishing.org
To understand consumer dietary requirements and resource use across ecosystems,
researchers have employed a variety of methods, including bulk stable isotope and fatty acid …

Ambient temperature CO2 fixation to pyruvate and subsequently to citramalate over iron and nickel nanoparticles

T Beyazay, KS Belthle, C Farès, M Preiner… - Nature …, 2023 - nature.com
The chemical reactions that formed the building blocks of life at origins required catalysts,
whereby the nature of those catalysts influenced the type of products that accumulated …

Citramalate synthase yields a biosynthetic pathway for isoleucine and straight-and branched-chain ester formation in ripening apple fruit

N Sugimoto, P Engelgau, AD Jones… - Proceedings of the …, 2021 - National Acad Sciences
A plant pathway that initiates with the formation of citramalate from pyruvate and acetyl-CoA
by citramalate synthase (CMS) is shown to contribute to the synthesis of α-ketoacids and …

Carbon metabolic pathways in phototrophic bacteria and their broader evolutionary implications

KH Tang, YJ Tang, RE Blankenship - Frontiers in Microbiology, 2011 - frontiersin.org
Photosynthesis is the biological process that converts solar energy to biomass, bio-products,
and biofuel. It is the only major natural solar energy storage mechanism on Earth. To satisfy …

Systems-Level Metabolic Flux Profiling Elucidates a Complete, Bifurcated Tricarboxylic Acid Cycle in Clostridium acetobutylicum

D Amador-Noguez, XJ Feng, J Fan… - Journal of …, 2010 - Am Soc Microbiol
Obligatory anaerobic bacteria are major contributors to the overall metabolism of soil and
the human gut. The metabolic pathways of these bacteria remain, however, poorly …

Metabolic engineering of Escherichia coli for the production of 1,3-diaminopropane, a three carbon diamine

TU Chae, WJ Kim, S Choi, SJ Park, SY Lee - Scientific Reports, 2015 - nature.com
Bio-based production of chemicals from renewable resources is becoming increasingly
important for sustainable chemical industry. In this study, Escherichia coli was metabolically …

Parallel labeling experiments and metabolic flux analysis: Past, present and future methodologies

SB Crown, MR Antoniewicz - Metabolic engineering, 2013 - Elsevier
Radioactive and stable isotopes have been applied for decades to elucidate metabolic
pathways and quantify carbon flow in cellular systems using mass and isotope balancing …

Parallel labeling experiments for pathway elucidation and 13C metabolic flux analysis

MR Antoniewicz - Current Opinion in Biotechnology, 2015 - Elsevier
Highlights•Parallel labeling experiments with multiple tracers improve resolution of pathway
fluxes.•13 C-metabolic flux analysis is increasingly applied to non-model organisms.• …

Metabolic pathway confirmation and discovery through 13C-labeling of proteinogenic amino acids

L You, L Page, X Feng, B Berla… - Journal of visualized …, 2012 - pmc.ncbi.nlm.nih.gov
Microbes have complex metabolic pathways that can be investigated using biochemistry
and functional genomics methods. One important technique to examine cell central …