Plastics: environmental and biotechnological perspectives on microbial degradation

D Danso, J Chow, WR Streit - Applied and environmental …, 2019 - Am Soc Microbiol
Plastics are widely used in the global economy, and each year, at least 350 to 400 million
tons are being produced. Due to poor recycling and low circular use, millions of tons …

Enigmatic persistence of dissolved organic matter in the ocean

T Dittmar, ST Lennartz, H Buck-Wiese… - Nature Reviews Earth & …, 2021 - nature.com
Marine dissolved organic matter (DOM) contains more carbon than the combined stocks of
Earth's biota. Organisms in the ocean continuously release a myriad of molecules that …

Contrastive learning in protein language space predicts interactions between drugs and protein targets

R Singh, S Sledzieski, B Bryson… - Proceedings of the …, 2023 - National Acad Sciences
Sequence-based prediction of drug–target interactions has the potential to accelerate drug
discovery by complementing experimental screens. Such computational prediction needs to …

Advances in ultrahigh-throughput screening for directed enzyme evolution

U Markel, KD Essani, V Besirlioglu, J Schiffels… - Chemical Society …, 2020 - pubs.rsc.org
Enzymes are versatile catalysts and their synthetic potential has been recognized for a long
time. In order to exploit their full potential, enzymes often need to be re-engineered or …

Microbial enzymes will offer limited solutions to the global plastic pollution crisis

J Chow, P Perez‐Garcia, R Dierkes… - Microbial …, 2023 - Wiley Online Library
Global economies depend on the use of fossil‐fuel‐based polymers with 360–400 million
metric tons of synthetic polymers being produced per year. Unfortunately, an estimated 60 …

De novo DNA synthesis using polymerase-nucleotide conjugates

S Palluk, DH Arlow, T De Rond, S Barthel… - Nature …, 2018 - nature.com
Oligonucleotides are almost exclusively synthesized using the nucleoside phosphoramidite
method, even though it is limited to the direct synthesis of∼ 200 mers and produces …

Machine learning modeling of family wide enzyme-substrate specificity screens

S Goldman, R Das, KK Yang… - PLoS computational …, 2022 - journals.plos.org
Biocatalysis is a promising approach to sustainably synthesize pharmaceuticals, complex
natural products, and commodity chemicals at scale. However, the adoption of biocatalysis …

An archaeal lid-containing feruloyl esterase degrades polyethylene terephthalate

P Perez-Garcia, J Chow, E Costanzi… - Communications …, 2023 - nature.com
Polyethylene terephthalate (PET) is a commodity polymer known to globally contaminate
marine and terrestrial environments. Today, around 80 bacterial and fungal PET-active …

[HTML][HTML] A review on the immobilization of pepsin: A Lys-poor enzyme that is unstable at alkaline pH values

R Morellon-Sterling, O Tavano, JM Bolivar… - International journal of …, 2022 - Elsevier
Pepsin is a protease used in many different applications, and in many instances, it is utilized
in an immobilized form to prevent contamination of the reaction product. This enzyme has …

Ultrahigh-throughput directed evolution of a metal-free α/β-hydrolase with a Cys-His-Asp triad into an efficient phosphotriesterase

JD Schnettler, OJ Klein, TS Kaminski… - Journal of the …, 2022 - ACS Publications
Finding new mechanistic solutions for biocatalytic challenges is key in the evolutionary
adaptation of enzymes, as well as in devising new catalysts. The recent release of man …