Proteomics of colorectal cancer: Tumors, organoids, and cell cultures—A minireview

PH Lindhorst, AB Hummon - Frontiers in molecular biosciences, 2020 - frontiersin.org
Proteomics, the study of the complete protein composition of a sample, is an important field
for cancer research. Changes in the proteome can serve as a biomarker of cancer or lead to …

Comparative N-Glycan Profiling of Colorectal Cancer Cell Lines Reveals Unique Bisecting GlcNAc and α-2,3-Linked Sialic Acid Determinants Are Associated with …

MK Sethi, M Thaysen-Andersen, JT Smith… - Journal of proteome …, 2014 - ACS Publications
Advances in colorectal cancer (CRC) diagnosis will be enhanced by development of more
sensitive and reliable methods for early detection of the disease when treatment is more …

Secretome proteomic approaches for biomarker discovery: an update on colorectal cancer

A Cevenini, S Orrù, E Imperlini - Medicina, 2020 - mdpi.com
Searching for new cancer-related biomarkers is a key priority for the early detection of solid
tumors, such as colorectal cancer (CRC), in clinically relevant biological fluids. The cell line …

Proteogenomic analysis of human colon carcinoma cell lines LIM1215, LIM1899, and LIM2405

S Fanayan, JT Smith, LY Lee, F Yan… - Journal of proteome …, 2013 - ACS Publications
As part of the genome-wide and chromosome-centric human proteomic project (C-HPP), we
have integrated shotgun proteomics approach and a genome-wide transcriptomic approach …

MOPED enables discoveries through consistently processed proteomics data

R Higdon, E Stewart, L Stanberry… - Journal of proteome …, 2014 - ACS Publications
The Model Organism Protein Expression Database (MOPED, http://moped. proteinspire. org)
is an expanding proteomics resource to enable biological and biomedical discoveries …

Protannotator: a semiautomated pipeline for chromosome-wise functional annotation of the “missing” human proteome

MT Islam, G Garg, WS Hancock, BA Risk… - Journal of Proteome …, 2014 - ACS Publications
The chromosome-centric human proteome project (C-HPP) aims to define the complete set
of proteins encoded in each human chromosome. The neXtProt database (September 2013) …

The discovery and validation of novel protein and peptide biomarkers

EC Nice - 2016 - books.rsc.org
The discovery and validation of sensitive and specific disease related biomarkers is
essential for efficient disease detection and surveillance, and will form a key component of …

Mapping the biomolecular deregulation in colorectal cancer using LC-MS/MS-based N-glycomics and proteomics: a quest for potential biomarkers

MK Sethi - 2022 - figshare.mq.edu.au
Colorectal cancer (CRC) is one of the most prevalent cancers worldwide. It follows a gradual
progression from small polyps to early and late metastatic stages where it spreads to distant …

Site-selective peptide and protein labelling & crosslinking

E Antonatou, SB Gunnoo, W Vannecke, A Madder - 2016 - books.rsc.org
Peptide and protein labelling methods have been under continuous development over the
last few decades. Labelled proteins and peptides are undoubtedly indispensable for the …