OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies

R Jackson, N Matentzoglu, JA Overton, R Vita… - Database, 2021 - academic.oup.com
Biological ontologies are used to organize, curate and interpret the vast quantities of data
arising from biological experiments. While this works well when using a single ontology …

A review of data mining ontologies

PK Sinha, SB Gajbe, S Debnath, S Sahoo… - Data Technologies …, 2021 - emerald.com
A review of data mining ontologies | Emerald Insight Books and journals Case studies Expert
Briefings Open Access Publish with us Advanced search A review of data mining ontologies …

Ontology repositories and semantic artefact catalogues with the ontoPortal technology

C Jonquet, J Graybeal, S Bouazzouni, M Dorf… - International Semantic …, 2023 - Springer
There is an explosion in the number of ontologies and semantic artefacts being produced in
science. This paper discusses the need for common platforms to receive, host, serve, align …

O'FAIRe: Ontology FAIRness evaluator in the agroportal semantic resource repository

E Amdouni, S Bouazzouni, C Jonquet - European Semantic Web …, 2022 - Springer
Abstract O'FAIRe, the Ontology FAIRness Evaluator, is a methodology to automatically
assess to which level a semantic resource or ontology respects the FAIR Principles. This …

FAIR or FAIRer? An integrated quantitative FAIRness assessment grid for semantic resources and ontologies

E Amdouni, C Jonquet - Research Conference on Metadata and …, 2021 - Springer
In open science, the expression “FAIRness assessment” refers to evaluating to which
degree a digital object is Findable, Accessible, Interoperable, and Reusable. Standard …

Biomedical ontologies and their development, management, and applications in and beyond China

H Pan, Y Zhu, S Yang, Z Wang, W Zhou… - Journal of Bio-X …, 2019 - spj.science.org
Since the boom of biomedical big data studies, various big data processing technologies
have been developed rapidly. As an important form of knowledge representation, ontology …

O'FAIRe makes you an offer: metadata-based automatic FAIRness assessment for ontologies and semantic resources

E Amdouni, S Bouazzouni… - International Journal of …, 2022 - inderscienceonline.com
We have not yet seen a clear methodology implemented and tooled to automatically assess
the level of FAIRness of semantic resources. We propose a metadata-based automatic …

Towards an interoperable ecosystem of research cohort and real-world data catalogues enabling multi-center studies

M Swertz, E van Enckevort, JL Oliveira… - Yearbook of medical …, 2022 - thieme-connect.com
Objectives: Existing individual-level human data cover large populations on many
dimensions such as lifestyle, demography, laboratory measures, clinical parameters, etc …

[PDF][PDF] EcoPortal: An Environment for FAIR Semantic Resources in the Ecological Domain.

X Kechagioglou, L Vaira, P Tomassino, N Fiore… - JOWO, 2021 - academia.edu
Ecological semantic resources are being increasingly required by researchers. To improve
their FAIRness, LifeWatch ERIC launched a repository to collect, describe, display, manage …

[PDF][PDF] Semantic-based process mining technique for annotation and modelling of domain processes

U Naeem, K Okoye, S Islam, S Sharif - International Journal of …, 2020 - qmro.qmul.ac.uk
Semantic technologies aim to represent information or models in formats that are not just
machine-readable but also machine-understandable. To this effect, this paper shows how …