Applications of virtual screening in bioprospecting: facts, shifts, and perspectives to explore the chemo-structural diversity of natural products

K Santana, LD Do Nascimento, A Lima e Lima… - Frontiers in …, 2021 - frontiersin.org
Natural products are continually explored in the development of new bioactive compounds
with industrial applications, attracting the attention of scientific research efforts due to their …

SuperDRUG2: a one stop resource for approved/marketed drugs

VB Siramshetty, OA Eckert, BO Gohlke… - Nucleic acids …, 2018 - academic.oup.com
Regular monitoring of drug regulatory agency web sites and similar resources for
information on new drug approvals and changes to legal status of marketed drugs is …

Bioinformatics perspective of drug repurposing

B Patel, B Gelat, M Soni, P Rathaur - Current Bioinformatics, 2024 - benthamdirect.com
Different diseases can be treated with various therapeutic agents. Drug discovery aims to
find potential molecules for existing and emerging diseases. However, factors, such as …

ROSHAMBO: Open-Source Molecular Alignment and 3D Similarity Scoring

R Atwi, Y Wang, S Sciabola… - Journal of Chemical …, 2024 - ACS Publications
Efficient virtual screening techniques are critical in drug discovery for identifying potential
drug candidates. We present an open-source package for molecular alignment and 3D …

Insights about multi-targeting and synergistic neuromodulators in Ayurvedic herbs against epilepsy: integrated computational studies on drug-target and protein …

N Choudhary, V Singh - Scientific reports, 2019 - nature.com
Epilepsy, that comprises a wide spectrum of neuronal disorders and accounts for about one
percent of global disease burden affecting people of all age groups, is recognised as …

Deciphering the multi-scale mechanisms of Tephrosia purpurea against polycystic ovarian syndrome (PCOS) and its major psychiatric comorbidities: studies from …

N Choudhary, S Choudhary, A Kumar, V Singh - Gene, 2021 - Elsevier
Abstract Tephrosia purpurea (T. purpurea), a plant belonging to Fabaceae (pea) family, is a
well-known Ayurvedic herb and commonly known as Sarapunkha in traditional Indian …

ChemTreeMap: an interactive map of biochemical similarity in molecular datasets

J Lu, HA Carlson - Bioinformatics, 2016 - academic.oup.com
Motivation: What if you could explain complex chemistry in a simple tree and share that data
online with your collaborators? Computational biology often incorporates diverse chemical …

Similar compounds versus similar conformers: complementarity between PubChem 2-D and 3-D neighboring sets

S Kim, EE Bolton, SH Bryant - Journal of Cheminformatics, 2016 - Springer
Background PubChem is a public repository for biological activities of small molecules. For
the efficient use of its vast amount of chemical information, PubChem performs 2 …

Modelling DNA repair pathways: recent advances and future directions

F Gentile, J A. Tuszynski… - Current Pharmaceutical …, 2016 - benthamdirect.com
Background: A major class of chemotherapy drugs targets the genome of cancer cells.
These DNA damaging agents induce damage to the DNA helix, resulting in the programmed …

Aplicação da Triagem Virtual no planejamento de teste colorimétrico para identificação preliminar de canabinoides sintéticos

R MACEDO, W ALENCAR, K COSTA… - Revista Brasileira de …, 2024 - revista.rbc.org.br
Os canabinóides sintéticos constituem um grupo de Novas Substâncias Psicoativas (NSP)
que mimetizam os efeitos da Cannabis sativa, pois atuam nos mesmos receptores …