DNA extraction from FFPE tissue samples–a comparison of three procedures
AK Sarnecka, D Nawrat, M Piwowar, J Ligęza… - Contemporary …, 2019 - termedia.pl
Results The results demonstrated that the yields of total DNA extracted using either Maxwell
or Cobas methods were significantly higher compared to the QIAamp method (p< 0.001) …
or Cobas methods were significantly higher compared to the QIAamp method (p< 0.001) …
[HTML][HTML] RNA extraction method impacts quality metrics and sequencing results in formalin-fixed, paraffin-embedded tissue samples
P Decruyenaere, K Verniers, F Poma-Soto… - Laboratory …, 2023 - Elsevier
Archived formalin-fixed, paraffin-embedded (FFPE) tissue samples are being increasingly
used in molecular cancer research. Compared with fresh-frozen tissue, the nucleic acid …
used in molecular cancer research. Compared with fresh-frozen tissue, the nucleic acid …
Effect of formalin fixation on pcr amplification of DNA isolated from healthy autopsy tissues
K Vitošević, M Todorović, T Varljen, Ž Slović, S Matić… - Acta …, 2018 - Elsevier
The aim of this study is to investigate the effects of formalin fixation on the degradation of
DNA molecules in five different healthy tissues exempted during the autopsy, as well as the …
DNA molecules in five different healthy tissues exempted during the autopsy, as well as the …
[PDF][PDF] Optimization of RNA extraction from formalin-fixed paraffin-embedded blocks for targeted next-generation sequencing
Y Choi, A Kim, J Kim, J Lee, SY Lee… - Journal of Breast …, 2017 - synapse.koreamed.org
Purpose Breast cancer has a high prevalence in Korea. To achieve personalized therapy for
breast cancer, long-term follow-up specimens are needed for next-generation sequencing …
breast cancer, long-term follow-up specimens are needed for next-generation sequencing …
Unveiling the arcanum of formalin-fixed paraffin-embedded archival tissue blocks: A valuable resource for genomic DNA extraction
Background: Formalin-fixed paraffin-embedded (FFPE) tissue blocks are routinely preserved
after pathological diagnosis and possess tremendous potential for biomarker discovery …
after pathological diagnosis and possess tremendous potential for biomarker discovery …
Nested PCR for the diagnosis of feline sporotrichosis from formalin-fixed and paraffin-embedded samples using different DNA extraction protocols
RLF Luiz, RC Menezes, SA Pereira… - Frontiers in Veterinary …, 2022 - frontiersin.org
Sporotrichosis is a chronic, cosmopolitan granulomatous mycosis that affects humans and
animals. The infection is caused by the dimorphic fungi Sporothrix sp. The aims of the …
animals. The infection is caused by the dimorphic fungi Sporothrix sp. The aims of the …
Real‐life data from standardized preanalytical coding (SPREC) in tissue biobanking and its dual use for sample characterization and process optimization
M Skoworonska, A Blank, I Centeno… - The Journal of …, 2023 - Wiley Online Library
The standardized preanalytical code (SPREC) aggregates warm ischemia (WIT), cold
ischemia (CIT), and fixation times (FIT) in a precise format. Despite its growing importance …
ischemia (CIT), and fixation times (FIT) in a precise format. Despite its growing importance …
Systematic comparison of quantity and quality of RNA recovered with commercial FFPE tissue extraction kits
Background FFPE tissue samples are commonly used in biomedical research and are a
valuable source for next-generation sequencing in oncology, however, extracting RNA from …
valuable source for next-generation sequencing in oncology, however, extracting RNA from …
A novel approach for rapid cell assessment to estimate DNA recovery from human bone tissue
We report on the use of a DNA staining dye to locate and record nucleated osteocytes and
other bone-related cells within sections of archived formalin-fixed and paraffin-embedded …
other bone-related cells within sections of archived formalin-fixed and paraffin-embedded …
Optimizing fixation protocols to improve molecular analysis from FFPE tissues
BJ Maraschin, VP Silva, L Rock, H Sun… - Brazilian dental …, 2017 - SciELO Brasil
Abstract Most Departments of Pathology around the world have a considerable archive of
formalin-fixed paraffin-embedded (FFPE) tissue suitable for molecular assessment. This …
formalin-fixed paraffin-embedded (FFPE) tissue suitable for molecular assessment. This …