Polyploidy and genome evolution in plants

PS Soltis, DB Marchant, Y Van de Peer… - Current opinion in …, 2015 - Elsevier
Plant genomes vary in size and complexity, fueled in part by processes of whole-genome
duplication (WGD; polyploidy) and subsequent genome evolution. Despite repeated …

Current trends in microsatellite genotyping

E Guichoux, L Lagache, S Wagner… - Molecular ecology …, 2011 - Wiley Online Library
Microsatellites have been popular molecular markers ever since their advent in the late
eighties. Despite growing competition from new genotyping and sequencing techniques, the …

[HTML][HTML] Applications of next generation sequencing in molecular ecology of non-model organisms

R Ekblom, J Galindo - Heredity, 2011 - nature.com
As most biologists are probably aware, technological advances in molecular biology during
the last few years have opened up possibilities to rapidly generate large-scale sequencing …

Doubling down on genomes: polyploidy and crop plants

S Renny‐Byfield, JF Wendel - American journal of botany, 2014 - Wiley Online Library
Polyploidy, or whole genome multiplication, is ubiquitous among angiosperms. Many crop
species are relatively recent allopolyploids, resulting from interspecific hybridization and …

Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines

JA Birchler, RA Veitia - … of the National Academy of Sciences, 2012 - National Acad Sciences
We summarize, in this review, the evidence that genomic balance influences gene
expression, quantitative traits, dosage compensation, aneuploid syndromes, population …

Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss

JC Schnable, NM Springer… - Proceedings of the …, 2011 - National Acad Sciences
Ancient tetraploidies are found throughout the eukaryotes. After duplication, one copy of
each duplicate gene pair tends to be lost (fractionate). For all studied tetraploidies, the loss …

The polyploidy revolution then… and now: Stebbins revisited

DE Soltis, CJ Visger, PS Soltis - American journal of botany, 2014 - Wiley Online Library
Polyploidy has long been considered a major force in plant evolution. G. Ledyard Stebbins,
Jr., an architect of the Modern Synthesis, elegantly addressed a broad range of topics, from …

Recent progress and challenges in population genetics of polyploid organisms: an overview of current state‐of‐the‐art molecular and statistical tools

F Dufresne, M Stift, R Vergilino, BK Mable - Molecular ecology, 2014 - Wiley Online Library
Despite the importance of polyploidy and the increasing availability of new genomic data,
there remain important gaps in our knowledge of polyploid population genetics. These gaps …

Extensive chromosomal variation in a recently formed natural allopolyploid species, Tragopogon miscellus (Asteraceae)

M Chester, JP Gallagher… - Proceedings of the …, 2012 - National Acad Sciences
Polyploidy, or whole genome duplication, has played a major role in the evolution of many
eukaryotic lineages. Although the prevalence of polyploidy in plants is well documented, the …

[HTML][HTML] Next-generation hybridization and introgression

AD Twyford, RA Ennos - Heredity, 2012 - nature.com
Hybridization has a major role in evolution—from the introgression of important phenotypic
traits between species, to the creation of new species through hybrid speciation. Molecular …