Environmental paleomicrobiology: using DNA preserved in aquatic sediments to its full potential
In‐depth knowledge about spatial and temporal variation in microbial diversity and function
is needed for a better understanding of ecological and evolutionary responses to global …
is needed for a better understanding of ecological and evolutionary responses to global …
Ancient DNA from marine sediments: Precautions and considerations for seafloor coring, sample handling and data generation
The study of ancient DNA (aDNA) from sediments (sed aDNA) offers great potential for
paleoclimate interpretation, and has recently been applied as a tool to characterise past …
paleoclimate interpretation, and has recently been applied as a tool to characterise past …
Ancient marine sediment DNA reveals diatom transition in Antarctica
Antarctica is one of the most vulnerable regions to climate change on Earth and studying the
past and present responses of this polar marine ecosystem to environmental change is a …
past and present responses of this polar marine ecosystem to environmental change is a …
Hybridisation capture allows DNA damage analysis of ancient marine eukaryotes
Marine sedimentary ancient DNA (sed aDNA) is increasingly used to study past ocean
ecosystems, however, studies have been severely limited by the very low amounts of DNA …
ecosystems, however, studies have been severely limited by the very low amounts of DNA …
Comparing sediment DNA extraction methods for assessing organic enrichment associated with marine aquaculture
Marine sediments contain a high diversity of micro-and macro-organisms which are
important in the functioning of biogeochemical cycles. Traditionally, anthropogenic …
important in the functioning of biogeochemical cycles. Traditionally, anthropogenic …
The challenges of reconstructing tropical biodiversity with sedimentary ancient DNA: A 2200-year-long metagenomic record from Bwindi impenetrable forest, Uganda
R Dommain, M Andama, MM McDonough… - Frontiers in Ecology …, 2020 - frontiersin.org
Sedimentary ancient DNA has been proposed as a key methodology for reconstructing
biodiversity over time. Yet, despite the concentration of Earth's biodiversity in the tropics, this …
biodiversity over time. Yet, despite the concentration of Earth's biodiversity in the tropics, this …
Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics
Sedimentary ancient DNA (sed aDNA) analyses are increasingly used to reconstruct marine
ecosystems. The majority of marine sed aDNA studies use a metabarcoding approach …
ecosystems. The majority of marine sed aDNA studies use a metabarcoding approach …
euka: Robust tetrapodic and arthropodic taxa detection from modern and ancient environmental DNA using pangenomic reference graphs
NA Vogel, JD Rubin, M Swartz… - Methods in Ecology …, 2023 - Wiley Online Library
Ancient environmental DNA (aeDNA) is a crucial source of information for past
environmental reconstruction. However, the computational analysis of aeDNA involves the …
environmental reconstruction. However, the computational analysis of aeDNA involves the …
An Outlook for the Acquisition of Marine Sedimentary Ancient DNA (sedaDNA) From North Atlantic Ocean Archive Material
CA Selway, L Armbrecht… - Paleoceanography and …, 2022 - Wiley Online Library
Studies incorporating sedimentary ancient DNA (sedaDNA) analyses to investigate paleo‐
environments have increased considerably over the last few years, and the possibility of …
environments have increased considerably over the last few years, and the possibility of …
Sedimentary DNA for tracking the long-term changes in biodiversity
Understanding long-term dynamics is vitally important for explaining current biodiversity
patterns and setting conservation goals in a changing world. However, the changes in …
patterns and setting conservation goals in a changing world. However, the changes in …