Advances and trends in omics technology development
X Dai, L Shen - Frontiers in Medicine, 2022 - frontiersin.org
The human history has witnessed the rapid development of technologies such as high-
throughput sequencing and mass spectrometry that led to the concept of 'omics' and …
throughput sequencing and mass spectrometry that led to the concept of 'omics' and …
Complex networks: Structure and dynamics
Coupled biological and chemical systems, neural networks, social interacting species, the
Internet and the World Wide Web, are only a few examples of systems composed by a large …
Internet and the World Wide Web, are only a few examples of systems composed by a large …
A scored human protein–protein interaction network to catalyze genomic interpretation
Genome-scale human protein–protein interaction networks are critical to understanding cell
biology and interpreting genomic data, but challenging to produce experimentally. Through …
biology and interpreting genomic data, but challenging to produce experimentally. Through …
Network biology: understanding the cell's functional organization
AL Barabasi, ZN Oltvai - Nature reviews genetics, 2004 - nature.com
A key aim of postgenomic biomedical research is to systematically catalogue all molecules
and their interactions within a living cell. There is a clear need to understand how these …
and their interactions within a living cell. There is a clear need to understand how these …
An automated method for finding molecular complexes in large protein interaction networks
Background Recent advances in proteomics technologies such as two-hybrid, phage
display and mass spectrometry have enabled us to create a detailed map of biomolecular …
display and mass spectrometry have enabled us to create a detailed map of biomolecular …
BioGRID: a general repository for interaction datasets
C Stark, BJ Breitkreutz, T Reguly, L Boucher… - Nucleic acids …, 2006 - academic.oup.com
Access to unified datasets of protein and genetic interactions is critical for interrogation of
gene/protein function and analysis of global network properties. BioGRID is a freely …
gene/protein function and analysis of global network properties. BioGRID is a freely …
Associating genes and protein complexes with disease via network propagation
A fundamental challenge in human health is the identification of disease-causing genes.
Recently, several studies have tackled this challenge via a network-based approach …
Recently, several studies have tackled this challenge via a network-based approach …
Proteome survey reveals modularity of the yeast cell machinery
Protein complexes are key molecular entities that integrate multiple gene products to
perform cellular functions. Here we report the first genome-wide screen for complexes in an …
perform cellular functions. Here we report the first genome-wide screen for complexes in an …
Global mapping of the yeast genetic interaction network
A genetic interaction network containing∼ 1000 genes and∼ 4000 interactions was
mapped by crossing mutations in 132 different query genes into a set of∼ 4700 viable gene …
mapped by crossing mutations in 132 different query genes into a set of∼ 4700 viable gene …
HINT: High-quality protein interactomes and their applications in understanding human disease
Background A global map of protein-protein interactions in cellular systems provides key
insights into the workings of an organism. A repository of well-validated high-quality protein …
insights into the workings of an organism. A repository of well-validated high-quality protein …