[HTML][HTML] GWAS: fast-forwarding gene identification and characterization in temperate cereals: lessons from barley–a review
Understanding the genetic complexity of traits is an important objective of small grain
temperate cereals yield and adaptation improvements. Bi-parental quantitative trait loci …
temperate cereals yield and adaptation improvements. Bi-parental quantitative trait loci …
The K = 2 conundrum
Assessments of population genetic structure have become an increasing focus as they can
provide valuable insight into patterns of migration and gene flow. structure, the most highly …
provide valuable insight into patterns of migration and gene flow. structure, the most highly …
[HTML][HTML] Population genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement
Aegilops tauschii, the diploid wild progenitor of the D subgenome of bread wheat, is a
reservoir of genetic diversity for improving bread wheat performance and environmental …
reservoir of genetic diversity for improving bread wheat performance and environmental …
The tomato pan-genome uncovers new genes and a rare allele regulating fruit flavor
Modern tomatoes have narrow genetic diversity limiting their improvement potential. We
present a tomato pan-genome constructed using genome sequences of 725 …
present a tomato pan-genome constructed using genome sequences of 725 …
pophelper: an R package and web app to analyse and visualize population structure
RM Francis - Molecular ecology resources, 2017 - Wiley Online Library
The pophelper r package and web app are software tools to aid in population structure
analyses. They can be used for the analyses and visualization of output generated from …
analyses. They can be used for the analyses and visualization of output generated from …
Clumpak: a program for identifying clustering modes and packaging population structure inferences across K
NM Kopelman, J Mayzel, M Jakobsson… - Molecular ecology …, 2015 - Wiley Online Library
The identification of the genetic structure of populations from multilocus genotype data has
become a central component of modern population‐genetic data analysis. Application of …
become a central component of modern population‐genetic data analysis. Application of …
Linking rhizosphere microbiome composition of wild and domesticated Phaseolus vulgaris to genotypic and root phenotypic traits
Plant domestication was a pivotal accomplishment in human history, but also led to a
reduction in genetic diversity of crop species compared to their wild ancestors. How this …
reduction in genetic diversity of crop species compared to their wild ancestors. How this …
[HTML][HTML] An overview of STRUCTURE: applications, parameter settings, and supporting software
L Porras-Hurtado, Y Ruiz, C Santos, C Phillips… - Frontiers in …, 2013 - frontiersin.org
Objectives: We present an up-to-date review of STRUCTURE software: one of the most
widely used population analysis tools that allows researchers to assess patterns of genetic …
widely used population analysis tools that allows researchers to assess patterns of genetic …
[HTML][HTML] The genome evolution and domestication of tropical fruit mango
Background Mango is one of the world's most important tropical fruits. It belongs to the family
Anacardiaceae, which includes several other economically important species, notably …
Anacardiaceae, which includes several other economically important species, notably …
[HTML][HTML] MIG-seq: an effective PCR-based method for genome-wide single-nucleotide polymorphism genotyping using the next-generation sequencing platform
Y Suyama, Y Matsuki - Scientific reports, 2015 - nature.com
Abstract Restriction-enzyme (RE)-based next-generation sequencing methods have
revolutionized marker-assisted genetic studies; however, the use of REs has limited their …
revolutionized marker-assisted genetic studies; however, the use of REs has limited their …