Improving big data governance in healthcare institutions: user experience research for honest broker based application to access healthcare big data

K Singh, S Li, I Jahnke, ML Alarcon… - Behaviour & …, 2024 - Taylor & Francis
Data users (researchers, scientists) in healthcare institutions need access to integrated
healthcare data to conduct timely analysis of diseases to serve the right population at the …

Scaling notebooks as re-configurable cloud workflows

Y Wang, S Koulouzis, R Bianchi, N Li, Y Shi… - Data …, 2022 - direct.mit.edu
Literate computing environments, such as the Jupyter (ie, Jupyter Notebooks, JupyterLab,
and JupyterHub), have been widely used in scientific studies; they allow users to …

Workflow management for scientific research computing with tapis workflows: Architecture and design decisions behind software for research computing pipelines

ND Freeman, J Stubbs, R Cardone - Practice and Experience in …, 2022 - dl.acm.org
Developing research computing workflows often demands significant understanding of
DevOps tooling and related software design patterns, requiring researchers to spend time …

Containerizing Visualization Software: Experiences and Best Practices

A Solis, WJ Allen, E Ferlanti - Practice and Experience in Advanced …, 2022 - dl.acm.org
The standard process for software development has changed dramatically in the past
decade. What was once a large effort of installing the same software across different …

Interactive Visualization of Protein RINs using NetworKit in the Cloud

E Angriman, F Brandt-Tumescheit… - 2022 IEEE …, 2022 - ieeexplore.ieee.org
Network analysis has been applied in diverse application domains. We consider an
application from protein dynamics, specifically residue interaction networks (RINs). While …

Detailed Functional Overview of an API and Workflow Engine for Scientific Research Computing

N Freeman, J Stubbs, R Cardone… - Practice and Experience in …, 2023 - dl.acm.org
Constructing and executing reproducible workflows is fundamental to performing research in
a variety of scientific domains. Many of the current commercial and open source solutions for …

A Comprehensive Cloud Architecture for Machine Learning-enabled Research

J Stubbs, D Indrakusuma, C Garcia, F Halbach… - … and Experience in …, 2024 - dl.acm.org
The success of machine learning (ML) algorithms, and deep learning in particular, is having
a transformative impact on a wide range of research disciplines, from astronomy, materials …

Development of Authenticated Clients and Applications for ICICLE CI Services--Final Report for the REHS Program, June-August, 2022

S Samar, M Chen, J Karpinski, M Ray, A Sarin… - arXiv preprint arXiv …, 2023 - arxiv.org
The Artificial Intelligence (AI) institute for Intelligent Cyberinfrastructure with Computational
Learning in the Environment (ICICLE) is funded by the NSF to build the next generation of …

Sophon: an Extensible Platform for Collaborative Research

S Pigozzi, F Faenza, C Canali - Practice and Experience in Advanced …, 2022 - dl.acm.org
In the last few years, the web-based interactive computational environment called Jupyter
notebook has been gaining more and more popularity as a platform for collaborative …

[PDF][PDF] THE DESIGN AND PROGRESS OF THE NETWORK AND COMPUTING SYSTEM FOR HEPS

H Hu, F Qi, X Wang, Y Cheng, Q Hu, H Zhang, Y Hu… - medsi2023.vrws.de
Abstract China's High Energy Photon Source (HEPS) is the first national high-energy
synchrotron radiation light source. The 14 beamlines for the phase I of HEPS will produces …