[HTML][HTML] Nanopore sequencing and its application to the study of microbial communities
L Ciuffreda, H Rodríguez-Pérez, C Flores - Computational and structural …, 2021 - Elsevier
Since its introduction, nanopore sequencing has enhanced our ability to study complex
microbial samples through the possibility to sequence long reads in real time using …
microbial samples through the possibility to sequence long reads in real time using …
Direct RNA sequencing reveals m6A modifications on adenovirus RNA are necessary for efficient splicing
Adenovirus is a nuclear replicating DNA virus reliant on host RNA processing machinery.
Processing and metabolism of cellular RNAs can be regulated by METTL3, which catalyzes …
Processing and metabolism of cellular RNAs can be regulated by METTL3, which catalyzes …
Nanopore-based detection of viral RNA modifications
The chemical modification of ribonucleotides plays an integral role in the biology of diverse
viruses and their eukaryotic host cells. Mapping the precise identity, location, and …
viruses and their eukaryotic host cells. Mapping the precise identity, location, and …
Adenovirus prevents dsRNA formation by promoting efficient splicing of viral RNA
Eukaryotic cells recognize intracellular pathogens through pattern recognition receptors,
including sensors of aberrant nucleic acid structures. Sensors of double-stranded RNA …
including sensors of aberrant nucleic acid structures. Sensors of double-stranded RNA …
Adenovirus remodeling of the host proteome and host factors associated with viral genomes
Viral infections are associated with extensive remodeling of the cellular proteome. Viruses
encode gene products that manipulate host proteins to redirect cellular processes or subvert …
encode gene products that manipulate host proteins to redirect cellular processes or subvert …
Combined nanopore and single-molecule real-time sequencing survey of human betaherpesvirus 5 transcriptome
Abstract Long-read sequencing (LRS), a powerful novel approach, is able to read full-length
transcripts and confers a major advantage over the earlier gold standard short-read …
transcripts and confers a major advantage over the earlier gold standard short-read …
Using direct RNA nanopore sequencing to deconvolute viral transcriptomes
DP Depledge, AC Wilson - Current protocols in microbiology, 2020 - Wiley Online Library
The genomes of DNA viruses encode deceptively complex transcriptomes evolved to
maximize coding potential within the confines of a relatively small genome. Defining the full …
maximize coding potential within the confines of a relatively small genome. Defining the full …