Classification of intrinsically disordered regions and proteins
Over the past decade, we have observed a massive increase in the amount of information
describing protein sequences from a variety of organisms. 1, 2 While this may reflect the …
describing protein sequences from a variety of organisms. 1, 2 While this may reflect the …
Intrinsically unstructured proteins and their functions
HJ Dyson, PE Wright - Nature reviews Molecular cell biology, 2005 - nature.com
Many gene sequences in eukaryotic genomes encode entire proteins or large segments of
proteins that lack a well-structured three-dimensional fold. Disordered regions can be highly …
proteins that lack a well-structured three-dimensional fold. Disordered regions can be highly …
DisProt in 2024: improving function annotation of intrinsically disordered proteins
MC Aspromonte, MV Nugnes, F Quaglia… - Nucleic Acids …, 2024 - academic.oup.com
Abstract DisProt (URL: https://disprot. org) is the gold standard database for intrinsically
disordered proteins and regions, providing valuable information about their functions. The …
disordered proteins and regions, providing valuable information about their functions. The …
DisProt 7.0: a major update of the database of disordered proteins
Abstract The Database of Protein Disorder (DisProt, URL: www. disprot. org) has been
significantly updated and upgraded since its last major renewal in 2007. The current release …
significantly updated and upgraded since its last major renewal in 2007. The current release …
Improving protein disorder prediction by deep bidirectional long short-term memory recurrent neural networks
Motivation Capturing long-range interactions between structural but not sequence neighbors
of proteins is a long-standing challenging problem in bioinformatics. Recently, long short …
of proteins is a long-standing challenging problem in bioinformatics. Recently, long short …
Length-dependent prediction of protein intrinsic disorder
Background Due to the functional importance of intrinsically disordered proteins or protein
regions, prediction of intrinsic protein disorder from amino acid sequence has become an …
regions, prediction of intrinsic protein disorder from amino acid sequence has become an …
FoldIndex©: a simple tool to predict whether a given protein sequence is intrinsically unfolded
J Prilusky, CE Felder, T Zeev-Ben-Mordehai… - …, 2005 - academic.oup.com
An easy-to-use, versatile and freely available graphic web server, FoldIndex© is described:
it predicts if a given protein sequence is intrinsically unfolded implementing the algorithm of …
it predicts if a given protein sequence is intrinsically unfolded implementing the algorithm of …
Hybrid feature selection by combining filters and wrappers
HH Hsu, CW Hsieh, MD Lu - Expert Systems with Applications, 2011 - Elsevier
Feature selection aims at finding the most relevant features of a problem domain. It is very
helpful in improving computational speed and prediction accuracy. However, identification of …
helpful in improving computational speed and prediction accuracy. However, identification of …
Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling
VN Uversky, CJ Oldfield… - Journal of Molecular …, 2005 - Wiley Online Library
Regulation, recognition and cell signaling involve the coordinated actions of many players.
To achieve this coordination, each participant must have a valid identification (ID) that is …
To achieve this coordination, each participant must have a valid identification (ID) that is …
SPOT-Disorder2: improved protein intrinsic disorder prediction by ensembled deep learning
Intrinsically disordered or unstructured proteins (or regions in proteins) have been found to
be important in a wide range of biological functions and implicated in many diseases. Due to …
be important in a wide range of biological functions and implicated in many diseases. Due to …