Microbial production of vitamin B12: a review and future perspectives
H Fang, J Kang, D Zhang - Microbial cell factories, 2017 - Springer
Vitamin B 12 is an essential vitamin that is widely used in medical and food industries.
Vitamin B 12 biosynthesis is confined to few bacteria and archaea, and as such its …
Vitamin B 12 biosynthesis is confined to few bacteria and archaea, and as such its …
Native and engineered promoters in natural product discovery
M Myronovskyi, A Luzhetskyy - Natural product reports, 2016 - pubs.rsc.org
Covers the period up to 2016 Bacterial-based natural products have long represented a
promising resource for the development of commercially relevant therapeutics, and more …
promising resource for the development of commercially relevant therapeutics, and more …
Engineering RGB color vision into Escherichia coli
J Fernandez-Rodriguez, F Moser, M Song… - Nature chemical …, 2017 - nature.com
Optogenetic tools use colored light to rapidly control gene expression in space and time. We
designed a genetically encoded system that gives Escherichia coli the ability to distinguish …
designed a genetically encoded system that gives Escherichia coli the ability to distinguish …
Computational design of small transcription activating RNAs for versatile and dynamic gene regulation
A longstanding goal of synthetic biology has been the programmable control of cellular
functions. Central to this is the creation of versatile regulatory toolsets that allow for …
functions. Central to this is the creation of versatile regulatory toolsets that allow for …
An automated model test system for systematic development and improvement of gene expression models
Gene expression models greatly accelerate the engineering of synthetic metabolic pathways
and genetic circuits by predicting sequence-function relationships and reducing trial-and …
and genetic circuits by predicting sequence-function relationships and reducing trial-and …
Precise quantification of translation inhibition by mRNA structures that overlap with the ribosomal footprint in N-terminal coding sequences
A Espah Borujeni, D Cetnar, I Farasat… - Nucleic acids …, 2017 - academic.oup.com
A mRNA's translation rate is controlled by several sequence determinants, including the
presence of RNA structures within the N-terminal regions of its coding sequences. However …
presence of RNA structures within the N-terminal regions of its coding sequences. However …
Automated physics-based design of synthetic riboswitches from diverse RNA aptamers
A Espah Borujeni, DM Mishler, J Wang… - Nucleic acids …, 2016 - academic.oup.com
Riboswitches are shape-changing regulatory RNAs that bind chemicals and regulate gene
expression, directly coupling sensing to cellular actuation. However, it remains unclear how …
expression, directly coupling sensing to cellular actuation. However, it remains unclear how …
Translation initiation is controlled by RNA folding kinetics via a ribosome drafting mechanism
A Espah Borujeni, HM Salis - Journal of the American Chemical …, 2016 - ACS Publications
RNA folding plays an important role in controlling protein synthesis as well as other cellular
processes. Existing models have focused on how RNA folding energetics control translation …
processes. Existing models have focused on how RNA folding energetics control translation …
Production of specific-molecular-weight hyaluronan by metabolically engineered Bacillus subtilis 168
P Jin, Z Kang, P Yuan, G Du, J Chen - Metabolic engineering, 2016 - Elsevier
Low-molecular-weight hyaluronan (LMW-HA) has attracted much attention because of its
many potential applications. Here, we efficiently produced specific LMW-HAs from sucrose …
many potential applications. Here, we efficiently produced specific LMW-HAs from sucrose …
Genetic circuit characterization by inferring RNA polymerase movement and ribosome usage
To perform their computational function, genetic circuits change states through a symphony
of genetic parts that turn regulator expression on and off. Debugging is frustrated by an …
of genetic parts that turn regulator expression on and off. Debugging is frustrated by an …