Community assembly of a euryhaline fish microbiome during salinity acclimation
VT Schmidt, KF Smith, DW Melvin… - Molecular …, 2015 - Wiley Online Library
Microbiomes play a critical role in promoting a range of host functions. Microbiome function,
in turn, is dependent on its community composition. Yet, how microbiome taxa are …
in turn, is dependent on its community composition. Yet, how microbiome taxa are …
Water mass‐specificity of bacterial communities in the North Atlantic revealed by massively parallel sequencing
Bacterial assemblages from subsurface (100 m depth), meso‐(200–1000 m depth) and
bathy‐pelagic (below 1000 m depth) zones at 10 stations along a North Atlantic Ocean …
bathy‐pelagic (below 1000 m depth) zones at 10 stations along a North Atlantic Ocean …
Influence of fishmeal-free diets on microbial communities in Atlantic salmon (Salmo salar) recirculation aquaculture systems
V Schmidt, L Amaral-Zettler, J Davidson… - Applied and …, 2016 - Am Soc Microbiol
Reliance on fishmeal as a primary protein source is among the chief economic and
environmental concerns in aquaculture today. Fishmeal-based feeds often require harvest …
environmental concerns in aquaculture today. Fishmeal-based feeds often require harvest …
Metagenomic analysis of a southern maritime Antarctic soil
DA Pearce, KK Newsham, MAS Thorne… - Frontiers in …, 2012 - frontiersin.org
Our current understanding of Antarctic soils is derived from direct culture on selective media,
biodiversity studies based on clone library construction and analysis, quantitative PCR …
biodiversity studies based on clone library construction and analysis, quantitative PCR …
Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities
T Stoeck, A Behnke, R Christen, L Amaral-Zettler… - BMC biology, 2009 - Springer
Background Recent advances in sequencing strategies make possible unprecedented
depth and scale of sampling for molecular detection of microbial diversity. Two major …
depth and scale of sampling for molecular detection of microbial diversity. Two major …
Microbial community structure across the tree of life in the extreme Rio Tinto
Understanding biotic versus abiotic forces that shape community structure is a fundamental
aim of microbial ecology. The acidic and heavy metal extreme Río Tinto (RT) in …
aim of microbial ecology. The acidic and heavy metal extreme Río Tinto (RT) in …
Bacterial community dynamics in full-scale activated sludge bioreactors: operational and ecological factors driving community assembly and performance
A Valentin-Vargas, G Toro-Labrador, AA Massol-Deya - 2012 - journals.plos.org
The assembling of bacterial communities in conventional activated sludge (CAS) bioreactors
was thought, until recently, to be chaotic and mostly unpredictable. Studies done over the …
was thought, until recently, to be chaotic and mostly unpredictable. Studies done over the …
Correlation models between environmental factors and bacterial resistance to antimony and copper
Antimony (Sb) and copper (Cu) are toxic heavy metals that are associated with a wide
variety of minerals. Sb (III)-oxidizing bacteria that convert the toxic Sb (III) to the less toxic Sb …
variety of minerals. Sb (III)-oxidizing bacteria that convert the toxic Sb (III) to the less toxic Sb …
Geochemical niches of iron-oxidizing acidophiles in acidic coal mine drainage
DS Jones, C Kohl, C Grettenberger… - Applied and …, 2015 - Am Soc Microbiol
ABSTRACT A legacy of coal mining in the Appalachians has provided a unique opportunity
to study the ecological niches of iron-oxidizing microorganisms. Mine-impacted, anoxic …
to study the ecological niches of iron-oxidizing microorganisms. Mine-impacted, anoxic …
Biogeography of sulfur-oxidizing Acidithiobacillus populations in extremely acidic cave biofilms
DS Jones, I Schaperdoth, JL Macalady - The ISME journal, 2016 - academic.oup.com
Abstract Extremely acidic (pH 0–1.5) Acidithiobacillus-dominated biofilms known as snottites
are found in sulfide-rich caves around the world. Given the extreme geochemistry and …
are found in sulfide-rich caves around the world. Given the extreme geochemistry and …