A fuzzy intelligent approach to the classification problem in gene expression data analysis

M Khashei, AZ Hamadani, M Bijari - Knowledge-Based Systems, 2012 - Elsevier
Classification is an important data mining task that widely used in several different real world
applications. In microarray analysis, classification techniques are applied in order to …

MM-CCNB: Essential protein prediction using MAX-MIN strategies and compartment of common neighboring approach

AK Payra, B Saha, A Ghosh - Computer Methods and Programs in …, 2023 - Elsevier
Background and objective Proteins are indispensable for the flow of the life of living
organisms. Protein pairs in interaction exhibit more functional activities than individuals …

[PDF][PDF] A weighted-SNR feature selection from independent component subspace for nb classification of microarray data

R Aziz, C Verma, N Srivastava - Int J Adv Biotec Res, 2015 - researchgate.net
One of the major challenges is a small sample size as compared to large features (genes)
number of microarray data. Feature selection is an important process for accurate …

Selection of genes mediating certain cancers, using a neuro-fuzzy approach

A Ghosh, BC Dhara, RK De - Neurocomputing, 2014 - Elsevier
In this article, we propose a methodology for selecting genes that may have a role in
mediating a disease in general and certain cancers in particular. The methodology, first of …

Alpha-plane based automatic general type-2 fuzzy clustering based on simulated annealing meta-heuristic algorithm for analyzing gene expression data

AD Torshizi, MHF Zarandi - Computers in biology and medicine, 2015 - Elsevier
This paper considers microarray gene expression data clustering using a novel two stage
meta-heuristic algorithm based on the concept of α-planes in general type-2 fuzzy sets. The …

High expression stability of microtubule affinity regulating kinase 3 (MARK3) makes it a reliable reference gene

CY Chia, CWX Lim, WT Leong, MHT Ling - IUBMB life, 2010 - Wiley Online Library
Difference in gene expressions is characteristic of the function of different cell types and
those genes with low expression variance can be used as standards for quantitative gene …

[HTML][HTML] A novel approach for the analysis of time-course gene expression data based on computing with words

A Rowhanimanesh - Journal of Biomedical Informatics, 2021 - Elsevier
In this paper, a novel approach is proposed for the analysis of time-course gene expression
data based on the path-breaking work of Zadeh, Computing with Words. This method can …

[PDF][PDF] Novel hybrid method for gene selection and cancer prediction

L Jing, MK Ng, T Zeng - International Journal of Computer and Information …, 2010 - Citeseer
Microarray data profiles gene expression on a whole genome scale, therefore, it provides a
good way to study associations between gene expression and occurrence or progression of …

Signal Peptidase Complex Subunit 1 and Hydroxyacyl‐CoA Dehydrogenase Beta Subunit Are Suitable Reference Genes in Human Lungs

IHK Too, MHT Ling - International Scholarly Research Notices, 2012 - Wiley Online Library
Lung cancer is a common cancer, and expression profiling can provide an accurate
indication to advance the medical intervention. However, this requires the availability of …

[PDF][PDF] Identification of Reference Genes by Meta-Microarray Analyses

IHK Too, SSJ Heng, OYW Chan, BMH Keng… - … and Technologies. New …, 2014 - Citeseer
The expression levels of reference genes used in gene expression studies are assumed to
not change under most circumstances. However, a number of studies have demonstrated …