Spatial omics and multiplexed imaging to explore cancer biology

SM Lewis, ML Asselin-Labat, Q Nguyen, J Berthelet… - Nature …, 2021 - nature.com
Understanding intratumoral heterogeneity—the molecular variation among cells within a
tumor—promises to address outstanding questions in cancer biology and improve the …

Ductal carcinoma in situ: to treat or not to treat, that is the question

M van Seijen, EH Lips, AM Thompson… - British journal of …, 2019 - nature.com
Ductal carcinoma in situ (DCIS) now represents 20–25% of all 'breast cancers' consequent
upon detection by population-based breast cancer screening programmes. Currently, all …

stLearn: integrating spatial location, tissue morphology and gene expression to find cell types, cell-cell interactions and spatial trajectories within undissociated tissues

D Pham, X Tan, J Xu, LF Grice, PY Lam, A Raghubar… - BioRxiv, 2020 - biorxiv.org
Spatial Transcriptomics is an emerging technology that adds spatial dimensionality and
tissue morphology to the genome-wide transcriptional profile of cells in an undissociated …

Genomic analysis defines clonal relationships of ductal carcinoma in situ and recurrent invasive breast cancer

EH Lips, T Kumar, A Megalios, LL Visser… - Nature …, 2022 - nature.com
Ductal carcinoma in situ (DCIS) is the most common form of preinvasive breast cancer and,
despite treatment, a small fraction (5–10%) of DCIS patients develop subsequent invasive …

Ductal carcinoma in situ: state-of-the-art review

LJ Grimm, H Rahbar, M Abdelmalak, AH Hall… - Radiology, 2022 - pubs.rsna.org
Ductal carcinoma in situ (DCIS) is a nonobligate precursor of invasive cancer, and its
detection, diagnosis, and management are controversial. DCIS incidence grew with the …

Archival single-cell genomics reveals persistent subclones during DCIS progression

K Wang, T Kumar, J Wang, DC Minussi, E Sei, J Li… - Cell, 2023 - cell.com
Ductal carcinoma in situ (DCIS) is a common precursor of invasive breast cancer. Our
understanding of its genomic progression to recurrent disease remains poor, partly due to …

Normal tissue architecture determines the evolutionary course of cancer

J West, RO Schenck, C Gatenbee… - Nature …, 2021 - nature.com
Cancer growth can be described as a caricature of the renewal process of the tissue of
origin, where the tissue architecture has a strong influence on the evolutionary dynamics …

Immune escape during breast tumor progression

CR Gil Del Alcazar, M Alečković, K Polyak - Cancer immunology research, 2020 - AACR
Immunotherapy using checkpoint inhibitors is one of the most promising current cancer
treatment strategies. However, in breast cancer, its success has been limited to a subset of …

Patterns of genomic instability in breast cancer

M Kalimutho, K Nones, S Srihari, PHG Duijf… - Trends in …, 2019 - cell.com
Breast cancer is one of the most common cancers affecting women. Despite significant
improvements in overall survival, it remains a significant cause of death worldwide. Genomic …

Whole-Exome Sequencing Analysis of the Progression from Non–Low-Grade Ductal Carcinoma In Situ to Invasive Ductal Carcinoma

F Pareja, DN Brown, JY Lee, A Da Cruz Paula… - Clinical Cancer …, 2020 - AACR
Purpose: Ductal carcinoma in situ (DCIS) is a nonobligate precursor of invasive breast
cancer. Here, we sought to investigate the level of intralesion genetic heterogeneity in DCIS …