Post-molecular systematics and the future of phylogenetics

RA Pyron - Trends in Ecology & Evolution, 2015 - cell.com
The time is past when a research program in systematics should be based on only a few
genes, extant taxa, and ultrametric trees. Cheap genome sequencing, powerful statistical …

Phylogenomics reveals rapid, simultaneous diversification of three major clades of Gondwanan frogs at the Cretaceous–Paleogene boundary

YJ Feng, DC Blackburn, D Liang… - Proceedings of the …, 2017 - National Acad Sciences
Frogs (Anura) are one of the most diverse groups of vertebrates and comprise nearly 90% of
living amphibian species. Their worldwide distribution and diverse biology make them well …

[PDF][PDF] Phylogenomics reveals ancient gene tree discordance in the amphibian tree of life

PM Hime, AR Lemmon, ECM Lemmon… - Systematic …, 2021 - academic.oup.com
Molecular phylogenies have yielded strong support for many parts of the amphibian Tree of
Life, but poor support for the resolution of deeper nodes, including relationships among …

Frog phylogeny: a time-calibrated, species-level tree based on hundreds of loci and 5,242 species

DM Portik, JW Streicher, JJ Wiens - Molecular Phylogenetics and Evolution, 2023 - Elsevier
Large-scale, time-calibrated phylogenies from supermatrix studies have become crucial for
evolutionary and ecological studies in many groups of organisms. However, in frogs (anuran …

Resolving relationships among the megadiverse butterflies and moths with a novel pipeline for anchored phylogenomics

JW Breinholt, C Earl, AR Lemmon… - Systematic …, 2018 - academic.oup.com
The advent of next-generation sequencing technology has allowed for thecollection of large
portions of the genome for phylogenetic analysis. Hybrid enrichment and transcriptomics are …

[PDF][PDF] An integrative taxonomic review of the South Asian microhylid genus Uperodon

S Garg, G Senevirathne, N Wijayathilaka, S Phuge… - Zootaxa, 2018 - researchgate.net
Based on a recent molecular phylogenetic study, the South Asian microhylid genus
Uperodon (subfamily Microhylinae) currently comprises of 12 valid species that are largely …

Molecular systematics of teioid lizards (Teioidea/Gymnophthalmoidea: Squamata) based on the analysis of 48 loci under tree‐alignment and similarity‐alignment

N Goicoechea, DR Frost, I De la Riva… - …, 2016 - Wiley Online Library
We infer phylogenetic relationships within Teioidea, a superfamily of Nearctic and
Neotropical lizards, using nucleotide sequences. Phylogenetic analyses relied on …

Phylogenomic support for evolutionary relationships of New World direct-developing frogs (Anura: Terraranae)

MP Heinicke, AR Lemmon, EM Lemmon… - Molecular phylogenetics …, 2018 - Elsevier
Phylogenomic approaches have proven able to resolve difficult branches in the tree of life.
New World direct-developing frogs (Terraranae) represent a large evolutionary radiation in …

Combining target enrichment and Sanger sequencing data to clarify the systematics of the diverse Neotropical butterfly subtribe Euptychiina (Nymphalidae, Satyrinae)

M Espeland, S Nakahara, T Zacca… - Systematic …, 2023 - Wiley Online Library
The diverse, largely Neotropical subtribe Euptychiina is widely regarded as one of the most
taxonomically challenging groups among all butterflies. Over the last two decades …

[HTML][HTML] A little frog leaps a long way: compounded colonizations of the Indian Subcontinent discovered in the tiny Oriental frog genus Microhyla (Amphibia …

VA Gorin, EN Solovyeva, M Hasan, H Okamiya… - PeerJ, 2020 - peerj.com
Frogs of the genus Microhyla include some of the world's smallest amphibians and
represent the largest radiation of Asian microhylids, currently encompassing 50 species …