Life history strategies of soil bacterial communities across global terrestrial biomes
The life history strategies of soil microbes determine their metabolic potential and their
response to environmental changes. Yet these strategies remain poorly understood. Here …
response to environmental changes. Yet these strategies remain poorly understood. Here …
Microbial dark matter could add uncertainties to metagenomic trait estimations
Methods Raw metagenomic sequence reads were downloaded from National Center for
Biotechnology Information accession number PRJEB18701. Raw reads were quality filtered …
Biotechnology Information accession number PRJEB18701. Raw reads were quality filtered …
Soil nutrient conditions alter viral lifestyle strategy and potential function in phosphorous and nitrogen metabolisms
As one of the most abundant members of microbial communities, viruses are considered to
influence prokaryotic mortality and biogeochemical cycles. While extensive research has …
influence prokaryotic mortality and biogeochemical cycles. While extensive research has …
The biogeography of soil microbiome potential growth rates
Z Zhou, C Wang, X Cha, T Zhou, X Pang… - Nature …, 2024 - nature.com
Soil microbial growth, a vital biogeochemical process, governs both the accrual and loss of
soil carbon. Here, we investigate the biogeography of soil microbiome potential growth rates …
soil carbon. Here, we investigate the biogeography of soil microbiome potential growth rates …
Fungal genome size and composition reflect ecological strategies along soil fertility gradients
HY Zhang, A Bissett, CA Aguilar‐Trigueros… - Ecology …, 2023 - Wiley Online Library
Genomic traits reflect the evolutionary processes that have led to ecological variation among
extant organisms, including variation in how they acquire and use resources. Soil fungi have …
extant organisms, including variation in how they acquire and use resources. Soil fungi have …
[HTML][HTML] Modelling soil prokaryotic traits across environments with the trait sequence database ampliconTraits and the R package MicEnvMod
J Donhauser, A Doménech-Pascual, X Han… - Ecological …, 2024 - Elsevier
We present a comprehensive, customizable workflow for inferring prokaryotic phenotypic
traits from marker gene sequences and modelling the relationships between these traits and …
traits from marker gene sequences and modelling the relationships between these traits and …
The hidden diversity and functional potential of Chloroflexota genomes in arsenic and antimony co-contaminated soils
H Wang, Q Wu, H Wang, F Liu, D Wu, X Wang… - Soil Ecology Letters, 2025 - Springer
A total of 170 middle-and high-quality Chloroflexota MAGs were reconstructed from As and
Sb co-contaminated soils. Many Chloroflexota MAGs have overlooked potential for C fixation …
Sb co-contaminated soils. Many Chloroflexota MAGs have overlooked potential for C fixation …
A mixed blessing of influent leachate microbes in downstream biotreatment systems of a full-scale landfill leachate treatment plant
In landfill leachate treatment plants (LLTPs), the microbiome plays a pivotal role in the
decomposition of organic compounds, reduction in nutrient levels, and elimination of toxins …
decomposition of organic compounds, reduction in nutrient levels, and elimination of toxins …
Modified biochar affects CO2 and N2O emissions from coastal saline soil by altering soil pH and elemental stoichiometry
Y Dong, X Zhang, X Wang, C Xie, J Liu, Y Cheng… - Science of The Total …, 2024 - Elsevier
The application of biochar in degraded farmland improves soil productivity while achieving
the recycling of agricultural waste. The collapse of the physical structure of coastal saline …
the recycling of agricultural waste. The collapse of the physical structure of coastal saline …
Warmer and drier ecosystems select for smaller bacterial genomes in global soils
Bacterial genome size reflects bacterial evolutionary processes and metabolic lifestyles, with
implications for microbial community assembly and ecosystem functions. However, to …
implications for microbial community assembly and ecosystem functions. However, to …