T cell antigen discovery

AV Joglekar, G Li - Nature methods, 2021 - nature.com
T cells respond to threats in an antigen-specific manner using T cell receptors (TCRs) that
recognize short peptide antigens presented on major histocompatibility complex (MHC) …

Engineering antibodies by yeast display

ET Boder, M Raeeszadeh-Sarmazdeh… - Archives of biochemistry …, 2012 - Elsevier
Since its first application to antibody engineering 15years ago, yeast display technology has
been developed into a highly potent tool for both affinity maturing lead molecules and …

[HTML][HTML] Deconstructing the peptide-MHC specificity of T cell recognition

ME Birnbaum, JL Mendoza, DK Sethi, S Dong… - Cell, 2014 - cell.com
In order to survey a universe of major histocompatibility complex (MHC)-presented peptide
antigens whose numbers greatly exceed the diversity of the T cell repertoire, T cell receptors …

Protein engineering and selection using yeast surface display

A Angelini, TF Chen, S de Picciotto, NJ Yang… - Yeast Surface Display …, 2015 - Springer
Yeast surface display is a powerful technology for engineering a broad range of protein
scaffolds. This protocol describes the process for de novo isolation of protein binders from …

Engineering novel and improved biocatalysts by cell surface display

MR Smith, E Khera, F Wen - Industrial & engineering chemistry …, 2015 - ACS Publications
Biocatalysts, especially enzymes, have the ability to catalyze reactions with high product
selectivity, utilize a broad range of substrates, and maintain activity at low temperature and …

The coming age of insect cells for manufacturing and development of protein therapeutics

CM Yee, AJ Zak, BD Hill, F Wen - Industrial & engineering …, 2018 - ACS Publications
Protein therapeutics is a rapidly growing segment of the pharmaceutical market. Currently,
the majority of protein therapeutics are manufactured in mammalian cells for their ability to …

TEPCAM: Prediction of T‐cell receptor–epitope binding specificity via interpretable deep learning

J Chen, B Zhao, S Lin, H Sun, X Mao, M Wang… - Protein …, 2024 - Wiley Online Library
The recognition of T‐cell receptor (TCR) on the surface of T cell to specific epitope
presented by the major histocompatibility complex is the key to trigger the immune response …

Yeast display of MHC-II enables rapid identification of peptide ligands from protein antigens (RIPPA)

R Liu, W Jiang, ED Mellins - Cellular & Molecular Immunology, 2021 - nature.com
CD4+ T cells orchestrate adaptive immune responses via binding of antigens to their
receptors through specific peptide/MHC-II complexes. To study these responses, it is …

[HTML][HTML] Directed evolution: selection of the host organism

A Pourmir, TW Johannes - Computational and structural biotechnology …, 2012 - Elsevier
Directed evolution has become a well-established tool for improving proteins and biological
systems. A critical aspect of directed evolution is the selection of a suitable host organism for …

Diversity‐oriented approaches for interrogating T‐cell receptor repertoire, ligand recognition, and function

ME Birnbaum, S Dong, KC Garcia - Immunological reviews, 2012 - Wiley Online Library
Molecular diversity lies at the heart of adaptive immunity. T‐cell receptors and peptide‐major
histocompatibility complex molecules utilize and rely upon an enormous degree of diversity …