A-to-I RNA editing—immune protector and transcriptome diversifier

E Eisenberg, EY Levanon - Nature Reviews Genetics, 2018 - nature.com
Modifications of RNA affect its function and stability. RNA editing is unique among these
modifications because it not only alters the cellular fate of RNA molecules but also alters …

The pilocarpine model of mesial temporal lobe epilepsy: Over one decade later, with more rodent species and new investigative approaches

M Lévesque, G Biagini, M de Curtis… - Neuroscience & …, 2021 - Elsevier
Fundamental work on the mechanisms leading to focal epileptic discharges in mesial
temporal lobe epilepsy (MTLE) often rests on the use of rodent models in which an initial …

Investigating RNA editing in deep transcriptome datasets with REDItools and REDIportal

C Lo Giudice, MA Tangaro, G Pesole, E Picardi - Nature protocols, 2020 - nature.com
RNA editing is a widespread post-transcriptional mechanism able to modify transcripts
through insertions/deletions or base substitutions. It is prominent in mammals, in which …

The evolution and adaptation of A-to-I RNA editing

AL Yablonovitch, P Deng, D Jacobson, JB Li - PLoS genetics, 2017 - journals.plos.org
Adenosine-to-inosine (A-to-I) RNA editing is an important post-transcriptional modification
that affects the information encoded from DNA to RNA to protein. RNA editing can generate …

The Q/R editing site of AMPA receptor GluA2 subunit acts as an epigenetic switch regulating dendritic spines, neurodegeneration and cognitive deficits in Alzheimer's …

AL Wright, LM Konen, BG Mockett, GP Morris… - Molecular …, 2023 - Springer
Background RNA editing at the Q/R site of GluA2 occurs with~ 99% efficiency in the healthy
brain, so that the majority of AMPARs contain GluA2 (R) instead of the exonically encoded …

The cell line A-to-I RNA editing catalogue

AA Schaffer, E Kopel, A Hendel, E Picardi… - Nucleic acids …, 2020 - academic.oup.com
Abstract Adenosine-to-inosine (A-to-I) RNA editing is a common post transcriptional
modification. It has a critical role in protecting against false activation of innate immunity by …

CircHivep2 contributes to microglia activation and inflammation via miR‐181a‐5p/SOCS2 signalling in mice with kainic acid‐induced epileptic seizures

G Xiaoying, M Guo, L Jie, Z Yanmei… - Journal of Cellular …, 2020 - Wiley Online Library
Epilepsy is a chronic brain disease characterized by recurrent seizures. Circular RNA
(circRNA) is a novel family of endogenous non‐coding RNAs that have been proposed to …

Transcriptome-wide profiling of A-to-I RNA editing by Slic-Seq

Q Wei, S Han, K Yuan, Z He, Y Chen, X Xi… - Nucleic Acids …, 2023 - academic.oup.com
Abstract Adenosine-to-inosine (A-to-I) RNA editing is a post-transcriptional processing event
involved in diversifying the transcriptome and is responsible for various biological …

Increased RNA editing in maternal immune activation model of neurodevelopmental disease

H Tsivion-Visbord, E Kopel, A Feiglin, T Sofer… - Nature …, 2020 - nature.com
The etiology of major neurodevelopmental disorders such as schizophrenia and autism is
unclear, with evidence supporting a combination of genetic factors and environmental …

A multi-sample approach increases the accuracy of transcript assembly

L Song, S Sabunciyan, G Yang, L Florea - Nature communications, 2019 - nature.com
Transcript assembly from RNA-seq reads is a critical step in gene expression and
subsequent functional analyses. Here we present PsiCLASS, an accurate and efficient …