Transcriptomics in aquaculture: current status and applications

S Chandhini, VJ Rejish Kumar - Reviews in Aquaculture, 2019 - Wiley Online Library
Transcriptomics is the analysis of total RNA transcript in a cell, which gives a broad idea of
cellular processes that are active and dormant. Recent advancement in next‐generation …

Gonadal transcriptomic analysis and differentially expressed genes in the testis and ovary of the Pacific white shrimp (Litopenaeus vannamei)

J Peng, P Wei, B Zhang, Y Zhao, D Zeng, X Chen, M Li… - BMC genomics, 2015 - Springer
Abstract Background The Pacific white shrimp (Litopenaeus vannamei) is the world's most
prevalent cultured crustacean species. However, the supply of high-quality broodstocks is …

[HTML][HTML] Transcriptomic analysis of brine shrimp Artemia franciscana across a wide range of salinities

JM Lee, BC Cho, JS Park - Marine Genomics, 2022 - Elsevier
Brine shrimp Artemia franciscana, a commercially important species, can thrive in a wide
range of salinities and is commonly found in hypersaline lakes and solar salterns …

Transcriptome profiling of banana shrimp (Fenneropenaeus merguiensis) ovaries and testes: Insights into FoxL2

W Potiyanadech, C Choomee, W Chotigeat - Plos one, 2023 - journals.plos.org
The banana shrimp is found in the Pacific and Indian Oceans. Female shrimp are preferred
for consumption because they are larger than males. Understanding the mechanism of sex …

Sex-Biased Gene Expression and Dosage Compensation on the Artemia franciscana Z-Chromosome

AK Huylmans, MA Toups, A Macon… - Genome Biology and …, 2019 - academic.oup.com
Males and females of Artemia franciscana, a crustacean commonly used in the aquarium
trade, are highly dimorphic. Sex is determined by a pair of ZW chromosomes, but the nature …

Characterization of the growth-related transcriptome in California red abalone (Haliotis rufescens) through RNA-Seq analysis

D Valenzuela-Miranda, MA Del Río-Portilla… - Marine genomics, 2015 - Elsevier
One of the largest detriments in the abalone aquaculture industry is the inherently low
growth rate of this marine gastropod. In order to confront this issue, greater molecular …

Hypersaline lagoons from Chile, the southern edge of the world

G Gajardo, S Redón - Lagoon Environments Around the World-A …, 2019 - books.google.com
Hypersaline lagoons distributed in arid and semiarid regions are unique ecosystems with
unique value stemming from their extremophile biodiversity, limnological properties and …

SNP Development in Penaeus vannamei via Next-Generation Sequencing and DNA Pool Sequencing

Y Huang, L Zhang, H Ge, G Wang, S Huang, Z Yang - Fishes, 2021 - mdpi.com
Next-generation sequencing and pool sequencing have been widely used in SNP (single-
nucleotide polymorphism) detection and population genetics research; however, there are …

Transcriptome Analysis of the Tadpole Shrimp (Triops longicaudatus) by Illumina Paired-End Sequencing: Assembly, Annotation, and Marker Discovery

J Seong, SW Kang, BB Patnaik, SY Park, HJ Hwang… - Genes, 2016 - mdpi.com
The tadpole shrimp (Triops longicaudatus) is an aquatic crustacean that helps control pest
populations. It inhabits freshwater ponds and pools and has been described as a living …

Transcriptomic analysis elucidates the molecular processes associated with hydrogen peroxide-induced diapause termination in Artemia-encysted embryos

B Chen, TW Chu, K Chiu, MC Hong, TM Wu, JW Ma… - PloS one, 2021 - journals.plos.org
Treatment with hydrogen peroxide (H2O2) raises the hatching rate through the development
and diapause termination of Artemia cysts. To comprehend the upstream genetic regulation …