Intestinal microbiota in functional bowel disorders: a Rome foundation report

M Simrén, G Barbara, HJ Flint, BMR Spiegel… - Gut, 2013 - gut.bmj.com
It is increasingly perceived that gut host–microbial interactions are important elements in the
pathogenesis of functional gastrointestinal disorders (FGID). The most convincing evidence …

[PDF][PDF] A threshold selection method from gray-level histograms

N Otsu - Automatica, 1975 - dspace.tul.cz
Summary 16S rRNA-targeted oligonucleotide probes for eubacteria (EUB338), ammonium-
oxidizing bacteria (Nsm156) and nitrite-oxidizing bacteria (Nb1000) were used for the rapid …

[HTML][HTML] Host range and emerging and reemerging pathogens

MEJ Woolhouse… - Emerging infectious …, 2005 - ncbi.nlm.nih.gov
An updated literature survey identified 1,407 recognized species of human pathogen, 58%
of which are zoonotic. Of the total, 177 are regarded as emerging or reemerging. Zoonotic …

Compost: its role, mechanism and impact on reducing soil-borne plant diseases

CM Mehta, U Palni, IH Franke-Whittle, AK Sharma - Waste management, 2014 - Elsevier
Soil-borne plant pathogens are responsible for causing many crop plant diseases, resulting
in significant economic losses. Compost application to agricultural fields is an excellent …

[HTML][HTML] Comparative analysis of pyrosequencing and a phylogenetic microarray for exploring microbial community structures in the human distal intestine

MJ Claesson, O O'Sullivan, Q Wang, J Nikkilä… - PloS one, 2009 - journals.plos.org
Background Variations in the composition of the human intestinal microbiota are linked to
diverse health conditions. High-throughput molecular technologies have recently elucidated …

Methods for measuring denitrification: diverse approaches to a difficult problem

PM Groffman, MA Altabet, JK Böhlke… - Ecological …, 2006 - Wiley Online Library
Denitrification, the reduction of the nitrogen (N) oxides, nitrate (NO3−) and nitrite (NO2−), to
the gases nitric oxide (NO), nitrous oxide (N2O), and dinitrogen (N2), is important to primary …

Biosensors for detection of pathogenic bacteria

D Ivnitski, I Abdel-Hamid, P Atanasov… - Biosensors and …, 1999 - Elsevier
This paper presents an overview of different physicochemical instrumental techniques for
direct and indirect identification of bacteria such as: infrared and fluorescence spectroscopy …

High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota

EG Zoetendal, M Rajilić-Stojanović, WM de Vos - Gut, 2008 - gut.bmj.com
The human gastrointestinal (GI) tract microbiota plays a pivotal role in our health. For more
than a decade a major input for describing the diversity of the GI tract microbiota has been …

Dysbiosis of fecal microbiota in Crohn's disease patients as revealed by a custom phylogenetic microarray

S Kang, SE Denman, M Morrison, Z Yu… - Inflammatory bowel …, 2010 - academic.oup.com
Background A custom phylogenetic microarray composed of small subunit ribosomal RNA
probes, representing≈ 500 bacterial species from the human and animal gut, was …

Bacterial community composition and function in sewage treatment systems

M Wagner, A Loy - Current opinion in biotechnology, 2002 - Elsevier
The application of modern molecular techniques has led to the identification, in situ
quantification, and partial ecophysiological characterisation of bacteria responsible for …