Crop phenomics and high-throughput phenotyping: past decades, current challenges, and future perspectives

W Yang, H Feng, X Zhang, J Zhang, JH Doonan… - Molecular plant, 2020 - cell.com
Since whole-genome sequencing of many crops has been achieved, crop functional
genomics studies have stepped into the big-data and high-throughput era. However …

Rice functional genomics: decades' efforts and roads ahead

R Chen, Y Deng, Y Ding, J Guo, J Qiu, B Wang… - Science China Life …, 2022 - Springer
Rice (Oryza sativa L.) is one of the most important crops in the world. Since the completion of
rice reference genome sequences, tremendous progress has been achieved in …

Evaluating physiological responses of plants to salinity stress

S Negrão, SM Schmöckel, M Tester - Annals of botany, 2017 - academic.oup.com
Background Because soil salinity is a major abiotic constraint affecting crop yield, much
research has been conducted to develop plants with improved salinity tolerance. Salinity …

Crop phenomics: current status and perspectives

C Zhao, Y Zhang, J Du, X Guo, W Wen, S Gu… - Frontiers in Plant …, 2019 - frontiersin.org
Reliable, automatic, multifunctional, and high-throughput phenotypic technologies are
increasingly considered important tools for rapid advancement of genetic gain in breeding …

A comprehensive review of high throughput phenotyping and machine learning for plant stress phenotyping

T Gill, SK Gill, DK Saini, Y Chopra, JP de Koff… - Phenomics, 2022 - Springer
During the last decade, there has been rapid adoption of ground and aerial platforms with
multiple sensors for phenotyping various biotic and abiotic stresses throughout the …

Salt stress under the scalpel–dissecting the genetics of salt tolerance

MJL Morton, M Awlia, N Al‐Tamimi, S Saade… - The Plant …, 2019 - Wiley Online Library
Salt stress limits the productivity of crops grown under saline conditions, leading to
substantial losses of yield in saline soils and under brackish and saline irrigation. Salt …

Genomics, physiology, and molecular breeding approaches for improving salt tolerance

AM Ismail, T Horie - Annual review of plant biology, 2017 - annualreviews.org
Salt stress reduces land and water productivity and contributes to poverty and food
insecurity. Increased salinization caused by human practices and climate change is …

Deep plant phenomics: a deep learning platform for complex plant phenotyping tasks

JR Ubbens, I Stavness - Frontiers in plant science, 2017 - frontiersin.org
Plant phenomics has received increasing interest in recent years in an attempt to bridge the
genotype-to-phenotype knowledge gap. There is a need for expanded high-throughput …

[HTML][HTML] Temporal dynamics of maize plant growth, water use, and leaf water content using automated high throughput RGB and hyperspectral imaging

Y Ge, G Bai, V Stoerger, JC Schnable - Computers and Electronics in …, 2016 - Elsevier
Automated collection of large scale plant phenotype datasets using high throughput imaging
systems has the potential to alleviate current bottlenecks in data-driven plant breeding and …

Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity

PP Edger, R VanBuren, M Colle, TJ Poorten… - …, 2018 - academic.oup.com
Background Although draft genomes are available for most agronomically important plant
species, the majority are incomplete, highly fragmented, and often riddled with assembly …