Music of metagenomics—A review of its applications, analysis pipeline, and associated tools

B Wajid, F Anwar, I Wajid, H Nisar, S Meraj… - Functional & integrative …, 2022 - Springer
This humble effort highlights the intricate details of metagenomics in a simple, poetic, and
rhythmic way. The paper enforces the significance of the research area, provides details …

Genome sequence of Exiguobacterium antarcticum B7, isolated from a biofilm in Ginger Lake, King George Island, Antarctica

AR Carneiro, RTJ Ramos, H Dall'Agnol, AC Pinto… - 2012 - Am Soc Microbiol
Exiguobacterium antarcticum is a psychotropic bacterium isolated for the first time from
microbial mats of Lake Fryxell in Antarctica. Many organisms of the genus Exiguobacterium …

Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production

SC Soares, E Trost, RTJ Ramos, AR Carneiro… - Journal of …, 2013 - Elsevier
Corynebacterium pseudotuberculosis is the causative agent of several veterinary diseases
in a broad range of economically important hosts, which can vary from caseous …

SHIVA-a web application for drug resistance and tropism testing in HIV

M Riemenschneider, T Hummel, D Heider - BMC bioinformatics, 2016 - Springer
Background Drug resistance testing is mandatory in antiretroviral therapy in human
immunodeficiency virus (HIV) infected patients for successful treatment. The emergence of …

[HTML][HTML] Progression of 'OMICS'methodologies for understanding the pathogenicity of Corynebacterium pseudotuberculosis: the Brazilian experience

FA Dorella, A Gala-Garcia, AC Pinto, B Sarrouh… - Computational and …, 2013 - Elsevier
Since the first successful attempt at sequencing the Corynebacterium pseudotuberculosis
genome, large amounts of genomic, transcriptomic and proteomic data have been …

Exploiting HIV-1 protease and reverse transcriptase cross-resistance information for improved drug resistance prediction by means of multi-label classification

M Riemenschneider, R Senge, U Neumann… - BioData mining, 2016 - Springer
Background Antiretroviral therapy is essential for human immunodeficiency virus (HIV)
infected patients to inhibit viral replication and therewith to slow progression of disease and …

Genome Sequence of Lactococcus lactis subsp. lactis NCDO 2118, a GABA-Producing Strain

LC Oliveira, TDL Saraiva, SC Soares… - Genome …, 2014 - Am Soc Microbiol
Lactococcus lactis subsp. lactis NCDO 2118 is a nondairy lactic acid bacterium, a xylose
fermenter, and a gamma-aminobutyric acid (GABA) producer isolated from frozen peas …

The Detection and Sequencing of a Broad-Host-Range Conjugative IncP-1β Plasmid in an Epidemic Strain of Mycobacterium abscessus subsp. bolletii

SC Leao, CK Matsumoto, A Carneiro, RT Ramos… - PLoS …, 2013 - journals.plos.org
Background An extended outbreak of mycobacterial surgical infections occurred in Brazil
during 2004–2008. Most infections were caused by a single strain of Mycobacterium …

Omics profiles used to evaluate the gene expression of Exiguobacterium antarcticum B7 during cold adaptation

HPMB Dall'Agnol, RA Baraúna, PHCG de Sá… - BMC genomics, 2014 - Springer
Background Exiguobacterium antarcticum strain B7 is a Gram-positive psychrotrophic
bacterial species isolated in Antarctica. Although this bacteria has been poorly studied, its …

Whole-genome sequence of Corynebacterium pseudotuberculosis strain Cp162, isolated from camel

SS Hassan, MPC Schneider, RTJ Ramos, AR Carneiro… - 2012 - Am Soc Microbiol
Corynebacterium pseudotuberculosis is a pathogen of great veterinary and economic
importance, since it affects livestock, mainly sheep and goats, worldwide, together with …