Computational strategies for the design of new enzymatic functions
In this contribution, recent developments in the design of biocatalysts are reviewed with
particular emphasis in the de novo strategy. Studies based on three different reactions …
particular emphasis in the de novo strategy. Studies based on three different reactions …
[图书][B] Computational organic chemistry
SM Bachrach - 2014 - books.google.com
The Second Edition demonstrates how computational chemistry continues to shed new light
on organic chemistry The Second Edition of author Steven Bachrach's highly acclaimed …
on organic chemistry The Second Edition of author Steven Bachrach's highly acclaimed …
Stepwise Diels–Alder: More than just an oddity? A computational mechanistic study
M Linder, T Brinck - The Journal of Organic Chemistry, 2012 - ACS Publications
We have employed hybrid DFT and SCS-MP2 calculations at the SMD-PCM–6-311++ G (2d,
2p)//6-31+ G (d) level to investigate the relationship between three possible channels for …
2p)//6-31+ G (d) level to investigate the relationship between three possible channels for …
Physics‐based enzyme design: Predicting binding affinity and catalytic activity
S Sirin, DA Pearlman… - … : Structure, Function, and …, 2014 - Wiley Online Library
Computational enzyme design is an emerging field that has yielded promising success
stories, but where numerous challenges remain. Accurate methods to rapidly evaluate …
stories, but where numerous challenges remain. Accurate methods to rapidly evaluate …
Computational study of a model system of enzyme-mediated [4+ 2] cycloaddition reaction
EG Gordeev, VP Ananikov - PLoS One, 2015 - journals.plos.org
A possible mechanistic pathway related to an enzyme-catalyzed [4+ 2] cycloaddition reac-
tion was studied by theoretical calculations at density functional (B3LYP, O3LYP, M062X) …
tion was studied by theoretical calculations at density functional (B3LYP, O3LYP, M062X) …
Computational design of a Diels–Alderase from a thermophilic esterase: the importance of dynamics
M Linder, AJ Johansson, TSG Olsson… - Journal of computer …, 2012 - Springer
A novel computational Diels–Alderase design, based on a relatively rare form of
carboxylesterase from Geobacillus stearothermophilus, is presented and theoretically …
carboxylesterase from Geobacillus stearothermophilus, is presented and theoretically …
Envisioning an enzymatic Diels–Alder reaction by in situ acid–base catalyzed diene generation
M Linder, AJ Johansson, B Manta, P Olsson… - Chemical …, 2012 - pubs.rsc.org
Envisioning an enzymatic Diels–Alder reaction by in situ acid–base catalyzed diene generation -
Chemical Communications (RSC Publishing) DOI:10.1039/C2CC31502E Royal Society of …
Chemical Communications (RSC Publishing) DOI:10.1039/C2CC31502E Royal Society of …
[HTML][HTML] Computational Enzyme Design: Advances, hurdles and possible ways forward
M Linder - Computational and Structural Biotechnology Journal, 2012 - Elsevier
This mini review addresses recent developments in computational enzyme design.
Successful protocols as well as known issues and limitations are discussed from an …
Successful protocols as well as known issues and limitations are discussed from an …
Computational Studies of Candida Antarctica Lipase B to Test Its Capability as a Starting Point To Redesign New Diels–Alderases
K Swiderek, V Moliner - The Journal of Physical Chemistry B, 2016 - ACS Publications
The design of new biocatalysts is a target that is receiving increasing attention. One of the
most popular reactions in this regard is the Diels–Alder cycloaddition because of its …
most popular reactions in this regard is the Diels–Alder cycloaddition because of its …
Artificial enzyme-catalyzed Diels-Alder cycloadditions
K Cottet, M Kolympadi, MC Lallemand… - Current Organic …, 2016 - ingentaconnect.com
Diels Alder cycloaddition is one of the most valuable reactions in organic chemistry for the
building of cyclic systems. Recent advances in metabolic engineering, computational …
building of cyclic systems. Recent advances in metabolic engineering, computational …