Applications and trends of machine learning in genomics and phenomics for next-generation breeding

S Esposito, D Carputo, T Cardi, P Tripodi - Plants, 2019 - mdpi.com
Crops are the major source of food supply and raw materials for the processing industry. A
balance between crop production and food consumption is continually threatened by plant …

Expression analysis of miRNAs and their targets related to salt stress in Solanum lycopersicum H-2274

Ö Çakır, B Arıkan, B Karpuz… - Biotechnology & …, 2021 - Taylor & Francis
The microRNAs (miRNAs) are a group of small non-coding RNAs found in both plants and
animals. Their functions and target genes have been identified in many plant species. It has …

The miR169n-NF-YA8 regulation module involved in drought resistance in Brassica napus L

J Li, Y Duan, N Sun, L Wang, S Feng, Y Fang, Y Wang - Plant Science, 2021 - Elsevier
As an ancient and conserved plant microRNA (miRNA) family, miR169 targets nuclear factor
Y subunit alpha (NF-YA) family members. The miR169-NF-YA module is associated with …

WRKY genes family study reveals tissue-specific and stress-responsive TFs in wild potato species

C Villano, S Esposito, V D'Amelia, R Garramone… - Scientific Reports, 2020 - nature.com
Wild potatoes, as dynamic resource adapted to various environmental conditions, represent
a powerful and informative reservoir of genes useful for breeding efforts. WRKY transcription …

LTR-TEs abundance, timing and mobility in Solanum commersonii and S. tuberosum genomes following cold-stress conditions

S Esposito, F Barteri, J Casacuberta, M Mirouze… - Planta, 2019 - Springer
Abstract Main conclusion Copia/Ale is the youngest lineage in both Solanum tuberosum and
S. commersonii. Within it, we identified nightshade, a new LTR element active in the …

Abiotic stress signalling in extremophile land plants

PN Boulc'h, E Caullireau, E Faucher… - Journal of …, 2020 - academic.oup.com
Plant life relies on complex arrays of environmental stress sensing and signalling
mechanisms. Extremophile plants develop and grow in harsh environments with extremes of …

Wild potatoes: A genetic reservoir for potato breeding

I Bashir, R Nicolao, G Heiden - Wild germplasm for genetic improvement in …, 2021 - Elsevier
Wild potatoes represent a large genetic reservoir for potato breeding with current use and
potential to provide countless genes for novel traits, and resistances for abiotic and biotic …

Coexpression gene network analysis of cold‐tolerant Solanum commersonii reveals new insights in response to low temperatures

S Esposito, R Aversano, J Bradeen, V D'Amelia… - Crop …, 2021 - Wiley Online Library
Among abiotic stressors, cold is one of the most harmful for the cultivated potato (Solanum
tuberosum L.), a frost‐sensitive crop. RNA sequencing (RNA‐seq) profiling of two different …

Solanum malmeanum, a promising wild relative for potato breeding

R Nicolao, P Gaiero, CM Castro… - Frontiers in Plant Science, 2023 - frontiersin.org
Crop wild relatives are gaining increasing attention. Their use in plant breeding is essential
to broaden the genetic basis of crops as well as to meet industrial demands, for global food …

[图书][B] Potato improvement in the post-genomics era

J Tiwari - 2022 - taylorfrancis.com
The book delves into post-genomics advances in potato improvement since the potato
genome sequencing in 2011. It includes recent developments in the field of potato genetic …