[HTML][HTML] The open EEGLAB portal interface: High-performance computing with EEGLAB
EEGLAB signal processing environment is currently the leading open-source software for
processing electroencephalographic (EEG) data. The Neuroscience Gateway (NSG …
processing electroencephalographic (EEG) data. The Neuroscience Gateway (NSG …
Simulation neurotechnologies for advancing brain research: parallelizing large networks in NEURON
WW Lytton, AH Seidenstein, S Dura-Bernal… - Neural …, 2016 - ieeexplore.ieee.org
Large multiscale neuronal network simulations are of increasing value as more big data are
gathered about brain wiring and organization under the auspices of a current major …
gathered about brain wiring and organization under the auspices of a current major …
Petabyte-scale multi-morphometry of single neurons for whole brains
Recent advances in brain imaging allow producing large amounts of 3-D volumetric data
from which morphometry data is reconstructed and measured. Fine detailed structural …
from which morphometry data is reconstructed and measured. Fine detailed structural …
A single Markov-type kinetic model accounting for the macroscopic currents of all human voltage-gated sodium channel isoforms
P Balbi, P Massobrio… - PLoS computational …, 2017 - journals.plos.org
Modelling ionic channels represents a fundamental step towards developing biologically
detailed neuron models. Until recently, the voltage-gated ion channels have been mainly …
detailed neuron models. Until recently, the voltage-gated ion channels have been mainly …
Functional specification of CCK+ interneurons by alternative isoforms of Kv4. 3 auxiliary subunits
CCK-expressing interneurons (CCK+ INs) are crucial for controlling hippocampal activity.
We found two firing phenotypes of CCK+ INs in rat hippocampal CA3 area; either …
We found two firing phenotypes of CCK+ INs in rat hippocampal CA3 area; either …
The CIPRES workbench: a flexible framework for creating science gateways
MA Miller, T Schwartz, P Hoover, K Yoshimoto… - Proceedings of the …, 2015 - dl.acm.org
Here we describe the CIPRES Workbench (CW), an open source software framework for
creating new science gateways with minimal overhead. The CW is a web application that …
creating new science gateways with minimal overhead. The CW is a web application that …
Towards building a trustworthy pipeline integrating Neuroscience Gateway and Open Science Chain
S Sivagnanam, S Yeu, K Lin, S Sakai, F Garzon… - Database, 2024 - academic.oup.com
When the scientific dataset evolves or is reused in workflows creating derived datasets, the
integrity of the dataset with its metadata information, including provenance, needs to be …
integrity of the dataset with its metadata information, including provenance, needs to be …
The neuroscience gateway: enabling large scale modeling and data processing in neuroscience
S Sivagnanam, K Yoshimoto, NT Carnevale… - Proceedings of the …, 2018 - dl.acm.org
The NSF funded Neuroscience Gateway (NSG) has been in operation since the early 2013.
We originally designed NSG to reduce technical and administrative barriers that exist to …
We originally designed NSG to reduce technical and administrative barriers that exist to …
Sleep waves in a large‐scale corticothalamic model constrained by activities intrinsic to neocortical networks and single thalamic neurons
M Dervinis, V Crunelli - CNS Neuroscience & Therapeutics, 2024 - Wiley Online Library
Aim Many biophysical and non‐biophysical models have been able to reproduce the
corticothalamic activities underlying different EEG sleep rhythms but none of them included …
corticothalamic activities underlying different EEG sleep rhythms but none of them included …
Neuroscience gateway–software dissemination and large-scale modeling and data processing on supercomputing resources
A Majumdar, S Sivagnanam, K Yoshimoto… - … and Experience in …, 2023 - dl.acm.org
The Neuroscience Gateway (NSG) has been in operation since 2013. Initially it started out
as a gateway providing high performance computing (HPC) resources to computational …
as a gateway providing high performance computing (HPC) resources to computational …