Retinoic acid signalling during development

M Rhinn, P Dollé - Development, 2012 - journals.biologists.com
Retinoic acid (RA) is a vitamin A-derived, non-peptidic, small lipophilic molecule that acts as
ligand for nuclear RA receptors (RARs), converting them from transcriptional repressors to …

Patterning the vertebrate neuraxis

A Lumsden, R Krumlauf - Science, 1996 - science.org
Neuraxial patterning is a continuous process that extends over a protracted period of
development. During gastrulation a crude anteroposterior pattern, detectable by molecular …

[HTML][HTML] FAN-C: a feature-rich framework for the analysis and visualisation of chromosome conformation capture data

K Kruse, CB Hug, JM Vaquerizas - Genome biology, 2020 - Springer
Chromosome conformation capture data, particularly from high-throughput approaches such
as Hi-C, are typically very complex to analyse. Existing analysis tools are often single …

Disentangling the many layers of eukaryotic transcriptional regulation

KM Lelli, M Slattery, RS Mann - Annual review of genetics, 2012 - annualreviews.org
Regulation of gene expression in eukaryotes is an extremely complex process. In this
review, we break down several critical steps, emphasizing new data and techniques that …

[HTML][HTML] Generation of caudal-type serotonin neurons and hindbrain-fate organoids from hPSCs

P Valiulahi, V Vidyawan, L Puspita, Y Oh, VB Juwono… - Stem Cell Reports, 2021 - cell.com
Summary Serotonin (5-HT) neurons, the major components of the raphe nuclei, arise from
ventral hindbrain progenitors. Based on anatomical location and axonal projection, 5-HT …

[HTML][HTML] The splicing regulator PTBP1 controls the activity of the transcription factor Pbx1 during neuronal differentiation

AJ Linares, CH Lin, A Damianov, KL Adams… - Elife, 2015 - elifesciences.org
The RNA-binding proteins PTBP1 and PTBP2 control programs of alternative splicing during
neuronal development. PTBP2 was found to maintain embryonic splicing patterns of many …

Emerging roles for retinoids in regeneration and differentiation in normal and disease states

LJ Gudas - Biochimica et Biophysica Acta (BBA)-Molecular and …, 2012 - Elsevier
The vitamin A (retinol) metabolite, all-trans retinoic acid (RA), is a signaling molecule that
plays key roles in the development of the body plan and induces the differentiation of many …

[HTML][HTML] A conserved Pbx-Wnt-p63-Irf6 regulatory module controls face morphogenesis by promoting epithelial apoptosis

E Ferretti, B Li, R Zewdu, V Wells, JM Hebert… - Developmental cell, 2011 - cell.com
Morphogenesis of mammalian facial processes requires coordination of cellular
proliferation, migration, and apoptosis to develop intricate features. Cleft lip and/or palate …

[HTML][HTML] Retinoic acid signaling in heart development: Application in the differentiation of cardiovascular lineages from human pluripotent stem cells

A Wiesinger, GJJ Boink, VM Christoffels, HD Devalla - Stem Cell Reports, 2021 - cell.com
Retinoic acid (RA) signaling plays an important role during heart development in
establishing anteroposterior polarity, formation of inflow and outflow tract progenitors, and …

[HTML][HTML] HAND2 targets define a network of transcriptional regulators that compartmentalize the early limb bud mesenchyme

M Osterwalder, D Speziale, M Shoukry, R Mohan… - Developmental cell, 2014 - cell.com
The genetic networks that govern vertebrate development are well studied, but how the
interactions of trans-acting factors with cis-regulatory modules (CRMs) are integrated into …