Deep learning for cellular image analysis

E Moen, D Bannon, T Kudo, W Graf, M Covert… - Nature …, 2019 - nature.com
Recent advances in computer vision and machine learning underpin a collection of
algorithms with an impressive ability to decipher the content of images. These deep learning …

Deep learning in nano-photonics: inverse design and beyond

PR Wiecha, A Arbouet, C Girard, OL Muskens - Photonics Research, 2021 - opg.optica.org
Deep learning in the context of nano-photonics is mostly discussed in terms of its potential
for inverse design of photonic devices or nano-structures. Many of the recent works on …

The role of machine learning to boost the bioenergy and biofuels conversion

Z Wang, X Peng, A Xia, AA Shah, Y Huang, X Zhu… - Bioresource …, 2022 - Elsevier
The development and application of bioenergy and biofuels conversion technology can play
a significant role for the production of renewable and sustainable energy sources in the …

Machine learning for active matter

F Cichos, K Gustavsson, B Mehlig… - Nature Machine …, 2020 - nature.com
The availability of large datasets has boosted the application of machine learning in many
fields and is now starting to shape active-matter research as well. Machine learning …

Avoiding a replication crisis in deep-learning-based bioimage analysis

RF Laine, I Arganda-Carreras, R Henriques… - Nature …, 2021 - nature.com
Deep learning algorithms are powerful tools for analyzing, restoring and transforming
bioimaging data. One promise of deep learning is parameter-free one-click image analysis …

A survey on applications of deep learning in microscopy image analysis

Z Liu, L Jin, J Chen, Q Fang, S Ablameyko, Z Yin… - Computers in biology …, 2021 - Elsevier
Advanced microscopy enables us to acquire quantities of time-lapse images to visualize the
dynamic characteristics of tissues, cells or molecules. Microscopy images typically vary in …

DeepSTORM3D: dense 3D localization microscopy and PSF design by deep learning

E Nehme, D Freedman, R Gordon, B Ferdman… - Nature …, 2020 - nature.com
An outstanding challenge in single-molecule localization microscopy is the accurate and
precise localization of individual point emitters in three dimensions in densely labeled …

Quantitative digital microscopy with deep learning

B Midtvedt, S Helgadottir, A Argun, J Pineda… - Applied Physics …, 2021 - pubs.aip.org
Video microscopy has a long history of providing insight and breakthroughs for a broad
range of disciplines, from physics to biology. Image analysis to extract quantitative …

Single-shot self-supervised object detection in microscopy

B Midtvedt, J Pineda, F Skärberg, E Olsén… - Nature …, 2022 - nature.com
Object detection is a fundamental task in digital microscopy, where machine learning has
made great strides in overcoming the limitations of classical approaches. The training of …

Current capabilities and future perspectives of FCS: super-resolution microscopy, machine learning, and in vivo applications

J Sankaran, T Wohland - Communications Biology, 2023 - nature.com
Fluorescence correlation spectroscopy (FCS) is a single molecule sensitive tool for the
quantitative measurement of biomolecular dynamics and interactions. Improvements in …