[HTML][HTML] Computational and experimental approaches for investigating nanoparticle-based drug delivery systems

M Ramezanpour, SSW Leung… - … et Biophysica Acta (BBA …, 2016 - Elsevier
Most therapeutic agents suffer from poor solubility, rapid clearance from the blood stream, a
lack of targeting, and often poor translocation ability across cell membranes. Drug/gene …

Coupled multiphysics modelling of sensors for chemical, biomedical, and environmental applications with focus on smart materials and low-dimensional …

S Singh, R Melnik - Chemosensors, 2022 - mdpi.com
Low-dimensional nanostructures have many advantages when used in sensors compared
to the traditional bulk materials, in particular in their sensitivity and specificity. In such …

The dynamics of meaningful social interactions and the emergence of collective knowledge

MM Dankulov, R Melnik, B Tadić - Scientific Reports, 2015 - nature.com
Collective knowledge as a social value may arise in cooperation among actors whose
individual expertise is limited. The process of knowledge creation requires meaningful …

Molecular dynamics simulations on drug delivery systems

Z Shariatinia - Modeling and Control of Drug Delivery Systems, 2021 - Elsevier
Molecular dynamics (MD) simulation is a robust method that is used as an in silico means in
the arena of computer-aided drug discovery and design to explore the interactions occurred …

Mathematical and computational models of RNA nanoclusters and their applications in data-driven environments

S Badu, R Melnik, S Singh - Molecular Simulation, 2020 - Taylor & Francis
Ribonucleic acid (RNA) is a fundamental molecule having several favourable structural
properties that can be used for various potential applications in the field of nanotechnology …

Coarse-grained models of RNA nanotubes for large time scale studies in biomedical applications

S Badu, S Prabhakar, R Melnik - Biomedicines, 2020 - mdpi.com
In order to describe the physical properties of large time scale biological systems, coarse-
grained models play an increasingly important role. In this paper we develop Coarse …

Atomistic to continuum model for studying mechanical properties of RNA nanotubes

S Badu, S Prabhakar, R Melnik… - Computer Methods in …, 2020 - Taylor & Francis
With rapid advancements in the emerging field of RNA nanotechnology, its current and
potential applications, new important problems arise in our quest to better understand …

Nonlocal Models in Biology and Life Sciences: Sources, Developments, and Applications

S Pal, R Melnik - arXiv preprint arXiv:2401.14651, 2024 - arxiv.org
Nonlocality is important in realistic mathematical models of physical and biological systems
at small-length scales. It characterizes the properties of two individuals located in different …

A molecular dynamics study of nanowire resonator bio-object detection

R Fallahpour, R Melnik - Journal of Mechanics in Medicine and …, 2022 - World Scientific
This paper presents a comprehensive analysis, carried out by the molecular dynamics (MD)
simulations, of the vibrations of silicon nanowire (SiNW) resonators, having diverse …

Prediction of solution properties and dynamics of RNAs by means of Brownian dynamics simulation of coarse-grained models: Ribosomal 5S RNA and phenylalanine …

AA Benítez, JG Hernandez Cifre, FG Diaz Banos… - BMC biophysics, 2015 - Springer
Background The possibility of validating biological macromolecules with locally disordered
domains like RNA against solution properties is helpful to understand their function. In this …