Genomic interventions for sustainable agriculture

A Bohra, U Chand Jha, ID Godwin… - Plant Biotechnology …, 2020 - Wiley Online Library
Agricultural production faces a Herculean challenge to feed the increasing global
population. Food production systems need to deliver more with finite land and water …

[HTML][HTML] Advances and challenges for QTL analysis and GWAS in the plant-breeding of high-yielding: a focus on rapeseed

SU Khan, S Saeed, MHU Khan, C Fan, S Ahmar… - Biomolecules, 2021 - mdpi.com
Yield is one of the most important agronomic traits for the breeding of rapeseed (Brassica
napus L), but its genetic dissection for the formation of high yield remains enigmatic, given …

The multi-allelic APRR2 gene is associated with fruit pigment accumulation in melon and watermelon

E Oren, G Tzuri, L Vexler, A Dafna… - Journal of …, 2019 - academic.oup.com
Color and pigment contents are important aspects of fruit quality and consumer acceptance
of cucurbit crops. Here, we describe the independent mapping and cloning of a common …

[HTML][HTML] RAINBOW: Haplotype-based genome-wide association study using a novel SNP-set method

K Hamazaki, H Iwata - PLoS computational biology, 2020 - journals.plos.org
Difficulty in detecting rare variants is one of the problems in conventional genome-wide
association studies (GWAS). The problem is closely related to the complex gene …

[HTML][HTML] Single-locus and multi-locus genome-wide association studies for intramuscular fat in Duroc pigs

R Ding, M Yang, J Quan, S Li, Z Zhuang, S Zhou… - Frontiers in …, 2019 - frontiersin.org
Intramuscular fat (IMF) is an important quantitative trait of meat, which affects the associated
sensory properties and nutritional value of pork. To gain a better understanding of the …

[HTML][HTML] Multi-locus genome-wide association study reveals the genetic architecture of stalk lodging resistance-related traits in maize

Y Zhang, P Liu, X Zhang, Q Zheng, M Chen… - Frontiers in Plant …, 2018 - frontiersin.org
Stalk lodging resistance, which is mainly measured by stem diameter (SD), stalk bending
strength (SBS), and rind penetrometer resistance (RPR) in maize, seriously affects the yield …

[HTML][HTML] Single-Locus and Multi-Locus Genome-Wide Association Studies in the Genetic Dissection of Fiber Quality Traits in Upland Cotton (Gossypium hirsutum L.)

C Li, Y Fu, R Sun, Y Wang, Q Wang - Frontiers in plant science, 2018 - frontiersin.org
A major breeding target in Upland cotton (Gossypium hirsutum L.) is to improve the fiber
quality. To address this issue, 169 diverse accessions, genotyped by 53,848 high-quality …

Genome‐wide association coupled gene to gene interaction studies unveil novel epistatic targets among major effect loci impacting rice grain chalkiness

G Misra, S Badoni, S Parween… - Plant Biotechnology …, 2021 - Wiley Online Library
Rice varieties whose quality is graded as excellent have a lower percent grain chalkiness
(PGC) of two per cent and below with higher whole grain yields upon milling, leading to …

Genome-wide association studies in the genetic dissection of ovule number, seed number, and seed weight in Brassica napus L.

SU Khan, J Yangmiao, S Liu, K Zhang… - Industrial Crops and …, 2019 - Elsevier
Ovule number (ON), seed per silique (SS), and thousand seed weight (TSW) are the most
important but complex traits affecting yield. This study undertook genome-wide association …

The genetics underlying metabolic signatures in a brown rice diversity panel and their vital role in human nutrition

Y Brotman, C Llorente‐Wiegand, G Oyong… - The Plant …, 2021 - Wiley Online Library
Brown rice (Oryza sativa) possesses various nutritionally dense bioactive phytochemicals
exhibiting a wide range of antioxidant, anti‐cancer, and anti‐diabetic properties known to …