Solvent viscosity and friction in protein folding dynamics
SJ Hagen - Current Protein and Peptide Science, 2010 - ingentaconnect.com
The famous Kramers rate theory for diffusion-controlled reactions has been extended in
numerous ways and successfully applied to many types of reactions. Its application to …
numerous ways and successfully applied to many types of reactions. Its application to …
Phase transition-induced elasticity of α-helical bioelastomeric fibres and networks
A Miserez, PA Guerette - Chemical Society Reviews, 2013 - pubs.rsc.org
Natural elastomeric fibres play central structural and functional roles in a variety of tissues
produced by many organisms from diverse Phyla. Most of these fibres feature amorphous …
produced by many organisms from diverse Phyla. Most of these fibres feature amorphous …
Concerted dihedral rotations give rise to internal friction in unfolded proteins
I Echeverria, DE Makarov… - Journal of the American …, 2014 - ACS Publications
Protein chains undergo conformational diffusion during folding and dynamics, experiencing
both thermal kicks and viscous drag. Recent experiments have shown that the …
both thermal kicks and viscous drag. Recent experiments have shown that the …
Peptide chain dynamics in light and heavy water: zooming in on internal friction
JCF Schulz, L Schmidt, RB Best… - Journal of the …, 2012 - ACS Publications
Frictional effects due to the chain itself, rather than the solvent, may have a significant effect
on protein dynamics. Experimentally, such “internal friction” has been investigated by …
on protein dynamics. Experimentally, such “internal friction” has been investigated by …
Short-range backbone dihedral rotations modulate internal friction in intrinsically disordered proteins
D Das, L Arora, S Mukhopadhyay - Journal of the American …, 2022 - ACS Publications
Protein folding and dynamics are governed by an intricate interplay of thermal and viscosity-
mediated effects. The solvent viscosity contributes to the frictional drag in protein dynamics …
mediated effects. The solvent viscosity contributes to the frictional drag in protein dynamics …
Exploring the role of internal friction in the dynamics of unfolded proteins using simple polymer models
RR Cheng, AT Hawk, DE Makarov - The Journal of Chemical Physics, 2013 - pubs.aip.org
Recent experiments showed that the reconfiguration dynamics of unfolded proteins are often
adequately described by simple polymer models. In particular, the Rouse model with …
adequately described by simple polymer models. In particular, the Rouse model with …
Rouse model with internal friction: A coarse grained framework for single biopolymer dynamics
BS Khatri, TCB McLeish - Macromolecules, 2007 - ACS Publications
Recent work has highlighted an intimate link between the internal friction of single
biopolymers and dynamics on an underlying energy landscape of conformational change …
biopolymers and dynamics on an underlying energy landscape of conformational change …
Effects of Proline on Internal Friction in Simulated Folding Dynamics of Several Alanine-Based α-Helical Peptides
A Świątek, K Kuczera… - The Journal of Physical …, 2024 - ACS Publications
We have studied in silico the effect of proline, a model cosolvent, on local and global friction
coefficients in (un) folding of several typical alanine-based α-helical peptides. Local friction …
coefficients in (un) folding of several typical alanine-based α-helical peptides. Local friction …
Marine polysaccharides in microencapsulation and application to aquaculture:“from sea to sea”
M Borgogna, B Bellich, A Cesàro - Marine drugs, 2011 - mdpi.com
This review's main objective is to discuss some physico-chemical features of
polysaccharides as intrinsic determinants for the supramolecular structures that can …
polysaccharides as intrinsic determinants for the supramolecular structures that can …
Pectin biopolymer mechanics and microstructure associated with polysaccharide phase transitions
A Pierce, Y Zheng, WL Wagner… - … Research Part A, 2020 - Wiley Online Library
Polysaccharide polymers like pectin can demonstrate striking and reversible changes in
their physical properties depending upon relatively small changes in water content. Recent …
their physical properties depending upon relatively small changes in water content. Recent …